Pairwise Alignments

Query, 401 a.a., Murein-DD-endopeptidase (EC 3.4.99.-) from Variovorax sp. SCN45

Subject, 391 a.a., D-alanyl-D-alanine carboxypeptidase from Vibrio cholerae E7946 ATCC 55056

 Score = 73.6 bits (179), Expect = 1e-17
 Identities = 69/247 (27%), Positives = 115/247 (46%), Gaps = 10/247 (4%)

Query: 135 TEDSLDLKSSVALVIDQDTHEVLFSKNDHAVLPIASLTKLMTGLLISE----AHLPNEEL 190
           T D+  + +   +++D  + +VL  K     L  ASLTK+MT  +I +     ++   + 
Sbjct: 31  TPDAPQIAAKGYVLMDYHSGKVLAEKEMDTKLSPASLTKMMTSYVIGQEVKRGNISLNDD 90

Query: 191 ITITQDDVDTEKRSSSRL--TVGTTLSRGELLHLALMSSENRAAHALGRTYPGGLSTFVS 248
           + I+++        SS++   VGTT+   +L    ++ S N A  A+     G    FV 
Sbjct: 91  VVISKNAWAKNFPDSSKMFVEVGTTVKVSDLNRGIIIQSGNDACVAMAEHVAGTEDAFVD 150

Query: 249 IMNAKAKMLGMKDTRYVEPTGLSSRN-QSSAQDLALLVNAAYSDATVRSLSTSPEYQVEV 307
           +MNA A  LGMK++ +    GL   N  S+  DLALL  A   D        S   Q   
Sbjct: 151 LMNAWASSLGMKNSHFTNSHGLDDPNLYSTPYDLALLGQALIRDVPEEYAIYSE--QKFT 208

Query: 308 GNRMLQFNTTNRLVKSPDWEIGVQKTGYISEAGQCLVMQAKVAGRKLIMVFLDSAGKFSR 367
            N + Q+N  N L+      +   KTG+ S AG  LV  A     +L+ V + +  + +R
Sbjct: 209 YNGITQYN-RNGLLWDKSMNVDGIKTGHTSGAGYNLVSSATEGNMRLVAVVMGTDNENAR 267

Query: 368 IADAERV 374
            A+++++
Sbjct: 268 KAESKKL 274