Pairwise Alignments

Query, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 228 a.a., amino acid ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  135 bits (341), Expect = 5e-37
 Identities = 80/216 (37%), Positives = 114/216 (52%)

Query: 1   MAYQFQFDALAPYTGQLVEGLLHTLGYAASSIVLGMAIGVAGSLALVYGGKPLRGVTRVY 60
           M Y   F A+      L+EGL  +LG A  +I+ G  IG+  +  L+     LR    +Y
Sbjct: 9   MTYSLNFAAVWRSFDLLLEGLALSLGLAFVAILAGCVIGLITAFGLISRRALLRKPAGLY 68

Query: 61  VEFFRNTPALVQLFLIYFGLPNLGIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRGL 120
           V   RNTP LV +   YF LP LG+RL    + V +LA+Y GAY+ EVFR GL+++P G 
Sbjct: 69  VTVIRNTPILVLVLFSYFALPELGVRLGKIESFVATLAIYSGAYLAEVFRGGLIAIPPGQ 128

Query: 121 SEAGAALGLRPRQVLVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVEDIFHAGSFI 180
            EAG A+GL   Q+   ++    LR+V PSL S M+     TSL + I V ++      I
Sbjct: 129 REAGLAIGLTEMQIRTSIIIPLMLRSVLPSLGSTMISLFKDTSLAAAIAVPELTFEARKI 188

Query: 181 DSRTFRSFEVYLVICAMYFVAVQALRVILGFVQRRL 216
           +  TFR  E ++V   +Y      L  ++   +RRL
Sbjct: 189 NVETFRVIETWIVASCLYVATCSLLAALMRAAERRL 224