Pairwise Alignments

Query, 221 a.a., ABC transporter, permease protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 221 a.a., polar amino acid ABC transporter inner membrane subunit from Klebsiella michiganensis M5al

 Score =  115 bits (289), Expect = 5e-31
 Identities = 68/216 (31%), Positives = 112/216 (51%), Gaps = 1/216 (0%)

Query: 1   MAYQFQFDALAPYTGQLVEGLLHTLGYAASSIVLGMAIGVAGSLALVYGGKPLRGVTRVY 60
           M YQ+ F  +      L++GL  TL     + ++G  +G+A  +    G +    +T  +
Sbjct: 1   MHYQWDFSLVWQNLPVLLKGLGVTLELWLLAGIVGTLLGLAVGVVRARGPRFFYPLTSAF 60

Query: 61  VEFFRNTPALVQLFLIYFGLPNL-GIRLEAPVAGVISLALYCGAYMVEVFRSGLMSVPRG 119
           VE FRNTP L+QL   Y+  P L GI+     A  ++L LY  AY  E+FR+GL S+ RG
Sbjct: 61  VEVFRNTPVLIQLIWFYYAFPVLVGIQFSTFGAAALALTLYTAAYSTEIFRAGLQSIERG 120

Query: 120 LSEAGAALGLRPRQVLVHVLFVPALRNVFPSLASQMVLTLIGTSLISQIGVEDIFHAGSF 179
             E   ALG+ P  +L  ++     R + P+L ++M+     TSL S + V ++ + G  
Sbjct: 121 QWEGAKALGMPPGVMLRRIILPQVFRRMLPALTNRMIELAKVTSLASILTVNELMYQGRL 180

Query: 180 IDSRTFRSFEVYLVICAMYFVAVQALRVILGFVQRR 215
           + S  +R  E++ V+  +YFV +     +   ++RR
Sbjct: 181 LSSTWYRPVEIFTVVALLYFVLIWPGSYLAARLERR 216