Pairwise Alignments

Query, 384 a.a., Domain of unknown function / Efflux ABC transporter, permease protein from Variovorax sp. SCN45

Subject, 365 a.a., ABC transporter permease from Vibrio cholerae E7946 ATCC 55056

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 79/351 (22%), Positives = 144/351 (41%), Gaps = 33/351 (9%)

Query: 26  VLLIMLIAPIIYGFFYPWPYGTQAVTRVPVAVVDQDHSALSRQIARFAMANPRLDVRMVT 85
           V++I LI  +++GF          V  +P+ VVDQ  S+ SR +         + V+   
Sbjct: 28  VVMIPLIQLLLFGFAI-----NTDVRNIPIGVVDQSDSSFSRLLVESVKVTQVIRVKQHY 82

Query: 86  SDVHEAQQALWRGEIEGYALLPADLKRSVLRGTSAVVTIEGNGAYALLNKAVLYGFSEAV 145
             V+EA++A+  G+I    +LP+DL             +  +     L + ++ G    +
Sbjct: 83  LTVNEAEKAIASGDIRAALILPSDL-------------VARSQQQRELGQWLIDGSDTMI 129

Query: 146 GTVSAGVEIRKLQAGGQSAVQAARSRSPLNT--QLVALFNPTEGYGSYVVPAVALLILQQ 203
                G++   L       +Q      PL    ++  L+NP+      +VP +  +IL  
Sbjct: 130 AGALLGLKNMPLTDLPTLGIQ------PLTPTFEITLLYNPSRRSAVNIVPGLLGVILTM 183

Query: 204 TLLMGAAMLAGTWAEAGRLRA-------TMGAWLGRLGALSGFGFLSGLFYFGWVFFLQD 256
           T+++  +       E G L         ++   +G++      G +      G   F+  
Sbjct: 184 TMILFTSAAIVRERERGNLELLITTPVHSIELMIGKIVPYIFVGLIQVAIILGLGHFIFA 243

Query: 257 YPRGGNPLGAMVLLAFYVPAICTLGLLLGCWFRDRERALQVLLFTALPMAFLSGFSWPVE 316
            P  G     +     ++ A  TLGL++      + +A+Q+ +F  LP   LSGF +P E
Sbjct: 244 VPINGALSQILFGTLLFISASLTLGLVISTIANTQLQAMQMTVFILLPSILLSGFMFPYE 303

Query: 317 ALPGPLQALRWVFPSTAGIQGSLRLNQMGAPLHDVLPYIGVMLALTLAGLL 367
            +P   Q L  + P+T  ++    +   GA L D+      +   TL GL+
Sbjct: 304 GMPTAAQWLSELLPATHFMRLIRGIVLRGADLADLWRDTLWLALFTLFGLM 354