Pairwise Alignments

Query, 258 a.a., ABC transporter, substrate-binding protein (cluster 3, basic aa/glutamine/opines) from Variovorax sp. SCN45

Subject, 272 a.a., amino acid ABC transporter, periplasmic amino acid-binding protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 80.1 bits (196), Expect = 4e-20
 Identities = 64/255 (25%), Positives = 109/255 (42%), Gaps = 4/255 (1%)

Query: 4   MKTLFAAALVCAAPLLAHADKLADIKAKGAIRIATTIDAAPWGFTDAAGKPTGLDVELAE 63
           M  L AA  + A   LA    L +I A+G +R+       P+  TD  G   G D+++A+
Sbjct: 12  MAALLAAPAMAADIELAKKSTLNEIMARGELRVGFDAGYLPFEMTDKNGNYVGFDIDIAK 71

Query: 64  NVAKAMGVKLELQQVTGANRIPYLLSNKVDVVIAALGSSPERAKQVAFSKPYAAVYLGVY 123
            +A+AMGVK           IP LLS+K D++I+ +  + ER  ++ F+ PY  V   V 
Sbjct: 72  EMARAMGVKFVPVNTDFDGMIPALLSDKFDIIISGMTVTQERNLKINFADPYIVVGQTVL 131

Query: 124 GGK---GTPKFAKVSDLAGQTVAVPKGSTPDLSLSELAPGAKLIRLEDTASTISAFLSGQ 180
             K   G  K  K  +    TV    G+T + +   + P AK    +  A      ++G+
Sbjct: 132 LSKKLEGKVKSWKDLNSPEYTVVSRLGTTGEEAAKRMLPKAKFKSFDKEADGALEVVNGR 191

Query: 181 APLFA-ENNFIAQKVADENPAKGIEMKSLIRISPAYMAVQPSETALLAEMNKIIDAQAAD 239
           A  +  +  F    +A++   K + +       P    ++  +   L  +N  +     D
Sbjct: 192 ADAWVYDMPFNVVFMAEQGKDKVVHLDKPFTYEPLGFGIKKGDPDFLNFLNNFMRQIKND 251

Query: 240 GSLAALRLKWFKDEQ 254
           G    +  KW +  +
Sbjct: 252 GRYDRIYDKWMRSTE 266