Pairwise Alignments

Query, 160 a.a., Ribonuclease HI (EC 3.1.26.4) from Variovorax sp. SCN45

Subject, 254 a.a., ribonuclease H (RefSeq) from Shewanella loihica PV-4

 Score = 72.8 bits (177), Expect = 4e-18
 Identities = 48/143 (33%), Positives = 73/143 (51%), Gaps = 7/143 (4%)

Query: 13  TEVVIYTDGACKGNPGPGGWGAWLKSGTTEKDLFGGELNT--TNNRMELTAVIEGLAA-- 68
           +++ IYTDG C+ NPG  G G  L       +L+ G  N   TNN  EL A+ + L    
Sbjct: 84  SDIDIYTDGGCEPNPGEAGSGLALYKKGELAELWYGLYNPKGTNNTAELNALHQALLMAR 143

Query: 69  --LKRPCKVLLYLDSQYVRKGITEWIRGWKAKGWVTASKQPVKNVELWQRLDKLVTEGGH 126
             L++  +V ++ DSQY  K I+ W  GWKA GW   + + + N+ + Q   +L      
Sbjct: 144 QYLEQGLRVHIHSDSQYAIKCISLWAYGWKANGWRRKTGE-IANLSVIQEAHELYDSLKD 202

Query: 127 QIEWRWVKGHSGDPGNERADMLA 149
           +++   V  H G  GNE AD ++
Sbjct: 203 KLKLSHVAAHVGIEGNELADRMS 225