Pairwise Alignments

Query, 235 a.a., Two-component transcriptional response regulator, OmpR family from Variovorax sp. SCN45

Subject, 224 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

 Score =  176 bits (445), Expect = 4e-49
 Identities = 99/221 (44%), Positives = 135/221 (61%), Gaps = 1/221 (0%)

Query: 1   MRILLIEDDRKAARLLARGLQEEGFVVDVVHTAEEGDEEAFVIAYDLIVLDWMLPGKDGL 60
           MRILLIEDD + AR + RGL+ EG  +  +   + G E       DL++LD MLP  DGL
Sbjct: 1   MRILLIEDDERIARFIERGLKAEGHQIHRLKDGQYGLETVKSSEPDLLILDRMLPHVDGL 60

Query: 61  TLCRDLRQRGCKTPVLMLTARDALGDRVTGLNTGADDYLTKPFAFDELLARVRALLRRS- 119
           TLC+ +R  G +  +LML+A   + +R+ GL TGADDYL KPF F+ELLAR+ AL RR+ 
Sbjct: 61  TLCQQIRATGNQVLILMLSALGEVEERIQGLRTGADDYLAKPFHFEELLARIEALQRRNI 120

Query: 120 EIMRPMVLTLADLSLDPLSQRVLRGGMVLDLTHKEFAILQILLRHAGEVVSRSRLAEQVW 179
           +      L  ADL L   + RV R    ++LT KE +IL++ LR  G + SR R+   VW
Sbjct: 121 QTHTSNKLRFADLELCLSTMRVYRAEQPIELTAKEISILELFLRKPGHIFSRERILANVW 180

Query: 180 KDDLIAIDNLIDVHIGNLRRKVDAPPAPPLIHTVRGRGFRL 220
                 + N++DV++  LR+K+D P A PLI T RG G+ L
Sbjct: 181 GIHQDPLTNVVDVYMRRLRKKIDMPFAQPLIQTKRGMGYYL 221