Pairwise Alignments

Query, 450 a.a., Na+-driven multidrug efflux pump from Variovorax sp. SCN45

Subject, 460 a.a., Multi antimicrobial extrusion protein MatE from Pseudomonas syringae pv. syringae B728a

 Score =  141 bits (355), Expect = 5e-38
 Identities = 121/440 (27%), Positives = 193/440 (43%), Gaps = 16/440 (3%)

Query: 7   ERGLIARHAGTVLVGQLAVMAFGVTDTIIAGRYSEGALAALSVGAAIFVSVYVSLMGVLQ 66
           E  +I R AG ++  Q+A M    TDT++ G+    ALA   +GAA +  V    +GV+ 
Sbjct: 8   ELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFVSFFCVGVMA 67

Query: 67  ALLPVWAELHGAGRSNEVGRSVRQSLYLA-AIAIVVGMAALLAPAAVLRLTQVPPEMRGD 125
           A+  + +  HGAG +    R  +  L+LA  +A+V  +        +L+  Q    +   
Sbjct: 68  AVGTLVSIRHGAGDTEGATRLTQAGLWLAWGMALVAALLLWNLEPILLQFGQAEANVHMA 127

Query: 126 VEMYLRVLAFALAPALLFRLFSTLNQSLGKPQLVTWLQLGSLFVKLPLSIWFTFGGAGLP 185
            + +L  L FAL   L F        +LG+   V  + L        L+        GLP
Sbjct: 128 AQ-FLITLPFALPGLLSFMALRGFTSALGRAGPVMTISLAGAAANFVLNYALIHQWLGLP 186

Query: 186 AMGLVGCGWATLCVNWAMLACAIWLLRSSPFYRGYRLWERLEKPDWHQIRLFAKLGVPGG 245
            +GL+G G  T  V   M       +R  P Y  Y + + L K     +    +LG+P G
Sbjct: 187 NLGLMGIGLVTAIVTNCMALALALHIRLHPAYAAYPIRKGLSKLSRSHLGELWRLGLPIG 246

Query: 246 LAVLVEVTSFTLMALFIARLGTAAAAAHQIAANLMAVAYMVPLSLSIATSARVSFWLGAG 305
               VEV  FT  A  +  +G+   AAHQIA   +++A+MVP+ +S A + R+    GAG
Sbjct: 247 GTYAVEVGLFTFAAFCMGAMGSTQMAAHQIALQTVSMAFMVPVGMSYAVTMRIGQHYGAG 306

Query: 306 DAMRARHACRLGFEQTVLCALLFSTALVTFRHPLANVYSD--NPA---VVALAASLMLAV 360
           + +  R A RLG        L+F        H +  ++ D  +PA   +V LA  L+   
Sbjct: 307 NLLMVRMAGRLGIGFGGCVMLMFGLLFWLAPHLVIGLFLDINDPAFAEIVVLATKLLAIA 366

Query: 361 AAYHLADAMQTLCVFLLRCYRVTLAPLVIYCTMLWGLGLGGSYLLAYHGLGPWTAMRSPL 420
           A +   D  QT+ +  +R  +      +I     W +    ++LL +      T   +  
Sbjct: 367 ALFEFFDGTQTIAMGAIRGLKDARTTFLIGLGCYWLIAAPAAWLLGFS-----TDAGASG 421

Query: 421 AFWMMSAG----ALALTAMF 436
            +W ++ G    A+ALT  F
Sbjct: 422 VWWGLALGLFCSAVALTYAF 441