Pairwise Alignments

Query, 344 a.a., Phosphate ABC transporter, substrate-binding protein PstS (TC 3.A.1.7.1) from Variovorax sp. SCN45

Subject, 278 a.a., ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score = 47.8 bits (112), Expect = 3e-10
 Identities = 55/220 (25%), Positives = 88/220 (40%), Gaps = 20/220 (9%)

Query: 8   ATAGLLAAMFTIPAFAQ--DVTGAGASFPAPLYAKWASDFNKA-TGVKINYQSVGSGAGI 64
           A   LL ++ T+  F Q  ++T +G++  A +    A  +N+      +  Q VGS AGI
Sbjct: 8   AVCALLFSITTMTPFVQASEITISGSTSVARIMDVLAEKYNQQHPETYVAVQGVGSTAGI 67

Query: 65  KQIEAKTVDFGASDAPLKDDELQAKGLMQFPTVIGGVIPVVNIQGIKPGELKLNGQVLGD 124
             ++    D   +   L + E Q   L  F     G+  VVN          L  + L  
Sbjct: 68  SLLKKGVADIAMTSRYLTESEAQ-NTLHTFTLAFDGLAIVVNQAN---PVTNLTREQLYG 123

Query: 125 IYLGKITKWNDPAIKALNGSLALPDAAIAPVRRADGSGTSFLFTNYLSKVNAEWKSKVGE 184
           IY G+IT W     K + G+    D  IA V R   SGT + F + +         +V +
Sbjct: 124 IYKGQITNW-----KQVGGN----DQKIAVVTREASSGTRYSFESLMGLTKTVKDREVSD 174

Query: 185 GTAVNWPTGAGGKGNEGVAAFVNRLPNSIGYVEYAYVKQN 224
                 PT      N  +   VN    ++G++    V ++
Sbjct: 175 VA----PTALVVNSNSMMKTLVNHNTQAVGFISIGSVDKS 210