Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 281 a.a., aliphatic sulfonate ABC transporter permease from Sinorhizobium meliloti 1021

 Score =  106 bits (264), Expect = 6e-28
 Identities = 61/235 (25%), Positives = 121/235 (51%), Gaps = 2/235 (0%)

Query: 19  IVVLLAVWEGAILLFKIPPFVLPSLGSIVQHAFTDT--GRLMAALLATLGEALGGYALGS 76
           ++  LA+W+ A     I P V PS+G+I+   +T    G L+  +  +L  +   +    
Sbjct: 42  LIAFLALWQAASTAGWINPAVFPSVGAILSALWTGISGGALLDDIAISLQRSGTAFVGAV 101

Query: 77  ILGLLLAVLLLLAPPLERVVMPLAVAVNAVPTVAYAPLFLIWFGLGAASKIALVALAVGF 136
           +L + L +L+     +E  + P+         +A  P+F++  GLG ASK+ ++  A  F
Sbjct: 102 VLAIPLGLLMGQVRAIENALDPVLQLFRQTSALALYPVFILLLGLGEASKVFVIFWATLF 161

Query: 137 TMLVNALHGLKQADAAAVNLMRSFGAGPLKIVWRLRLPVAMPSVVTALRIGVPRSMIVAI 196
            +L++ + G+K+ D+  + + R +GA  L +  R+ LP A+PS+   LR+    ++++ I
Sbjct: 162 PLLLSTISGVKEVDSKLIEMARVYGASRLTVFRRVVLPGAVPSIFVGLRLSATTALLLLI 221

Query: 197 VGEMLGAYAGLGRMIYESTQQVDLLSVWSAVLIASVASMVFYGLLVWIDQKLVWW 251
             EM+GA  G+G  +  +     +  +++A+ I +   +V    LV+  ++L  W
Sbjct: 222 ASEMIGANKGIGFQVMNAQYNFQIPLMFAAIFILAGLGLVSNYALVFAQRRLCRW 276