Pairwise Alignments

Query, 252 a.a., Hydroxymethylpyrimidine ABC transporter, transmembrane component from Variovorax sp. SCN45

Subject, 305 a.a., putative ABC transporter permease protein from Phaeobacter inhibens DSM 17395

 Score =  100 bits (250), Expect = 3e-26
 Identities = 58/188 (30%), Positives = 106/188 (56%), Gaps = 5/188 (2%)

Query: 64  TLGEALGGYALGSILGLLLAVLLLLAPPLERVVMPLAVAVNAVPTVAYAPLFLI-WFGLG 122
           TL   L G+ +G+ LG+LLAV ++ +  ++  VMP A+    +P +A AP+ ++  + +G
Sbjct: 108 TLSATLLGFVIGTGLGILLAVGIVHSRVMDMSVMPWAIVSQTIPIIALAPMIIVVLYSIG 167

Query: 123 AAS---KIALVALAVGFTMLVNALHGLKQADAAAVNLMRSFGAGPLKIVWRLRLPVAMPS 179
                 K  + A    F ++V  + GL+  D   ++L++++ A   +  W+LRLP +MP 
Sbjct: 168 VQGILPKAVISAYLSFFPVVVGMVKGLRSPDQMQLDLLKTYNASLGQGFWKLRLPASMPY 227

Query: 180 VVTALRIGVPRSMIVAIVGEM-LGAYAGLGRMIYESTQQVDLLSVWSAVLIASVASMVFY 238
           +  +L+IG+  S++ AIVGE+  GA AGLG  +   +     + +WSA+  A++ +    
Sbjct: 228 LFASLKIGIAASLVGAIVGELPTGAVAGLGARLLAGSYYGQTVQIWSALFAAAILAAALV 287

Query: 239 GLLVWIDQ 246
            LL  I++
Sbjct: 288 ALLGVIER 295