Pairwise Alignments

Query, 335 a.a., Pyrimidine ABC transporter, substrate-binding component from Variovorax sp. SCN45

Subject, 330 a.a., hypothetical protein from Sinorhizobium meliloti 1021

 Score =  164 bits (416), Expect = 2e-45
 Identities = 98/290 (33%), Positives = 158/290 (54%), Gaps = 10/290 (3%)

Query: 7   RILAAVAASMALLAGMPASAAEKVSVRLKWLAQAQFAGFYVAKAKGFYDQAGLDLTINPG 66
           ++ + +AA +  LA   A+AAEKV+++LKW+ QAQFAG+YVAK KGFY++ GLD+ I PG
Sbjct: 4   KLTSLLAAGVFSLAAFHANAAEKVTLQLKWVTQAQFAGYYVAKDKGFYEEEGLDVEIKPG 63

Query: 67  GPNLNVETLVASGNDTFGLAGGTETVLLAREKGLPLVCIGVTVQNTPFTYVTYKDSGITK 126
           GP++    ++A G     +     + L  REKG+PLV I    + +       K+SG+  
Sbjct: 64  GPDIAPAQVIAGGGADV-IVDWMPSALATREKGVPLVNIAQPFKTSGMMLTCLKESGVKG 122

Query: 127 VKDFAGKKVATWFTGTQYTLYSMLASAGVK----QSDLTIVPQSGSMAPFVEKQFDVAAA 182
            +DF GK +  WF G +Y   S ++   +        +T++ Q  ++ P ++KQ    + 
Sbjct: 123 PEDFKGKTLGVWFFGNEYPFLSWMSHLKIPTDGGPDGVTVLKQGFNVDPLIQKQAACIST 182

Query: 183 TYYNELNTLKEQGL-GDKLTLIKPDDYGVVVQQDTVLVSE-KYRNEK-PQQVQAFMNATI 239
             YNE   + + G+  + L   K +D GV   +D + V E K ++E    ++  F+ A++
Sbjct: 183 MTYNEYWQVIDAGIKPEDLVTFKYEDQGVATLEDGLYVLEDKLKDEAFKDKMVKFVRASM 242

Query: 240 KGWKYALQNKKEAIDIVMA--AAPSLNRAHQEAMLDEFEKLVKAGKGTTD 287
           KGWK+A +N  EA DIV+   +  +    HQ+ M+ E  KL     G  D
Sbjct: 243 KGWKFAEENPDEAADIVLENDSTGAQTEKHQKRMMGEVAKLTAGSSGALD 292