Pairwise Alignments

Query, 655 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 627 a.a., sensor domain-containing phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  140 bits (354), Expect = 1e-37
 Identities = 114/439 (25%), Positives = 211/439 (48%), Gaps = 27/439 (6%)

Query: 210 RESYFQRMQMYRT-DLLSGLPNRRALSEYLEILLKRDQTQHVLLTFEVG--NLKEMVRTL 266
           R +  Q+++  R+ DL +G  NR AL + L + L +      L    +G  N +++   L
Sbjct: 192 RRAAEQQIEYQRSHDLGTGFLNRTALEQQLAMQLAQLAEHEELAVIHIGFANARQLQARL 251

Query: 267 GHDWTDKFWGHLARELMRQESLKLTSNGKSKCFQLSDLALAFVVK----ETSVKQIENSQ 322
           G+      W  + ++L  +E L   + G+    + +   L  ++K    +T + Q+ +  
Sbjct: 252 GYH----LWDDVLKQL--RERLGPVTEGELLTARPNSTNLTLILKAHPLDTQLNQLCHRL 305

Query: 323 LMPRLYADITEHLQVAGGPYSSAQLRCGITNVRMAGETNS-SSVLRNI---SLALQSSNQ 378
           +       +TE L V   PY           V ++ ET     +LR+     LA + S  
Sbjct: 306 IHAGQAQFVTEGLPVHLNPY---------IGVALSRETRDPQQLLRHAVSSMLACKDSGY 356

Query: 379 QIRYFHDSFSAQADRDADVHELMIGWIRTVNPPMSYQPKFDLETRQICGAEALLRANSAE 438
           ++ +   + +    R   +   ++  +R  +  + +QPK  ++T++  GAEALLR     
Sbjct: 357 KVFFHSPALADNHARQNQLENYLLQAVRNNDLLLYFQPKVSMKTQRWVGAEALLRWKHPV 416

Query: 439 GISLSPLYVLDVATRYQLLLKLEWCIVEMVIREIANCMASGFHMPLSVNISAASITVPGL 498
               S   ++ +A +  L+ ++   ++   ++  ++ +A      +++N+S+  +   G 
Sbjct: 417 LGEFSNETLIHMAEQNGLIFEVGHFVLHQALKAASDWLAVCPTFCIAINVSSVQLKNSGF 476

Query: 499 GERILDRLSRYSVPFELLSIEITESGHVPDMDTVRENVHRLHSAGVGLSLDDFGAGYSTL 558
            E+I D L+ Y  P   L +EITESG + D  T  + ++RLH+ GV LSLDDFG GY++ 
Sbjct: 477 VEQIRDLLALYCFPAHQLELEITESGLIVDEPTASDILNRLHTLGVTLSLDDFGTGYASF 536

Query: 559 TTLAKIPFNEVKIDYAMVSMIEQPRMNKAIGLA-LESATRYGATLVAEGVETEAQLAILI 617
             L K PF+ +KID + +  IE    ++ I  + L  A +    +V EG+E+  Q   ++
Sbjct: 537 QYLKKFPFDGIKIDKSFMEQIEHSESDQEIVRSMLHVAKKLNLNVVVEGIESTQQEQFIL 596

Query: 618 DMGIKFGQGFLLSKAVPMD 636
           + G   GQGFL  K +P +
Sbjct: 597 EQGCDVGQGFLYGKPMPSE 615