Pairwise Alignments

Query, 655 a.a., diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s) from Variovorax sp. SCN45

Subject, 684 a.a., bifunctional diguanylate cyclase/phosphodiesterase from Vibrio cholerae E7946 ATCC 55056

 Score =  120 bits (302), Expect = 2e-31
 Identities = 123/483 (25%), Positives = 213/483 (44%), Gaps = 28/483 (5%)

Query: 176 KISIHVTTLQIFGFSTSLFILGSVIALLRSDALVRESYFQRMQMYRTDLLSGLPNRRALS 235
           KI +H     + G  + L +L        +D   ++           D L+GL NR   +
Sbjct: 218 KIQLHAGCTSLLGNQSQLILLQD------ADEAPKQFSATTQVDAHIDSLTGLYNRHGFT 271

Query: 236 EYLEILLKRDQTQHVLLTFEVGNLKEMVRTLGHDWTDKFWGHLARELMRQESLKLTSNGK 295
           + LE  ++ ++T  V+L  ++ N K +  +LGH   DK    +A  L R    +      
Sbjct: 272 KRLEQCIQ-NETPLVMLYLDIDNFKNINDSLGHHIGDKVIKEVAARLKRLLPQQAVLG-- 328

Query: 296 SKCFQLSDLALAFVVKETSVKQIENSQLMPRLYADITEHLQVAGGPYSSAQLRCGITNVR 355
                L       ++ E    +     L  R+ + I +   +    + S +L C I +VR
Sbjct: 329 ----HLGGDEFGLILPEPEHNR-SAEMLADRIISLINQPFDLH---HFSKRLACSIGSVR 380

Query: 356 MAGETNSSSVL-RNISLALQSSNQQIRYFHDSFSAQADRDADVH-----ELMIGWIRTVN 409
             G+ N + VL +N   A+  + ++ R     F+ Q +++A +      EL    ++   
Sbjct: 381 YPGDGNDARVLLQNADTAMYEAKERGRNRLIKFNDQMNKEARMRLWLEIELQKA-LQQNG 439

Query: 410 PPMSYQPKFDLETRQICGAEALLRANSAEGISLSPLYVLDVATRYQLLLKLEWCIVEMVI 469
             + YQPK +     I GAEAL+R        +SP   + VA +  L+  L   ++  V 
Sbjct: 440 LEVWYQPKVNARDFSINGAEALVRWKHPVEGYISPGAFIPVAEKAGLIEHLGRVVMREVF 499

Query: 470 REIANCMASGFHMP--LSVNISAASITVPGLGERILDRLSRYSVPFELLSIEITESGHVP 527
             +      G  +P  +++NIS      P L + +   L    +    ++ E+TES  + 
Sbjct: 500 ATVKRWKLQGI-LPGRVAINISPEQFGNPQLIDYLEKLLRTTGLDPNNITFELTESAVMS 558

Query: 528 DMDTVRENVHRLHSAGVGLSLDDFGAGYSTLTTLAKIPFNEVKIDYAMVSMIEQ-PRMNK 586
           D +  ++ ++ +   G  LS+DDFG GYS+L  LA+ P +E+KID A +S I+  P+   
Sbjct: 559 DSEHTQQMLNAIKKLGFTLSIDDFGTGYSSLAYLARFPIDELKIDRAFISNIDTLPKQLT 618

Query: 587 AIGLALESATRYGATLVAEGVETEAQLAILIDMGIKFGQGFLLSKAVPMDDLIELARRER 646
            I   +        T+VAEGVET+ Q  +L ++     QGF   +  P  ++ EL  + R
Sbjct: 619 VIENIINLGRSLNLTVVAEGVETQQQATLLSNLNCHSIQGFHFYRPQPKHEVEELFAQNR 678

Query: 647 GER 649
             R
Sbjct: 679 RHR 681