Pairwise Alignments

Query, 450 a.a., General secretion pathway protein E from Variovorax sp. SCN45

Subject, 564 a.a., type II secretion system protein E:General secretory system II, protein E, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  313 bits (802), Expect = 9e-90
 Identities = 169/388 (43%), Positives = 242/388 (62%), Gaps = 16/388 (4%)

Query: 77  DDAPVIRMINALLAQAARDGASDIHLESFETHSVVRYRVDGTLRDVVAPRKALHAALISR 136
           DDAPV+R +N +L  A R G+SD+H E +E    VR R DG L +V  P   L   + +R
Sbjct: 178 DDAPVVRFVNKMLMDAIRLGSSDLHFEPYEKIFRVRLRTDGILHEVARPPIHLANRIAAR 237

Query: 137 IKIMSQLDIAEKRLPQDGRITLRVGG-RPIDVRVSTVPTAHGERAVLRLLEKDAGRLRLE 195
           +K+M+ LDI+E+R PQDGR+ LRV   + ID R++T+PT  GE+ V+R+L+  + ++ ++
Sbjct: 238 LKVMASLDISERRKPQDGRVKLRVSKTKAIDFRMNTLPTLWGEKIVMRILDPTSAQMGID 297

Query: 196 RLGMAPDTLAELTRLVRQPHGIVLVTGPTGSGKTTTLYAALGQLDLSTSNILTVEDPVEY 255
            LG  PD  A     ++ P G++LVTGPTGSGKT +LY  L  L+    NI T EDPVE 
Sbjct: 298 ALGYEPDQKALYLEALKLPQGMILVTGPTGSGKTVSLYTGLNILNTVDINISTAEDPVEI 357

Query: 256 DLPGIGQIPVHGKIGMTFGAALRAALRQDPDNIMIGEIRDLETAQIAVQSSLTGHGVLAS 315
           +L GI Q+ V+ + G+ F  ALRA LRQDPD IM+GEIRDLETA+IA+++S TGH VL++
Sbjct: 358 NLEGINQVNVNPRQGLDFSQALRAFLRQDPDVIMVGEIRDLETAEIAIKASQTGHMVLST 417

Query: 316 LHTNDAVSAVTRMTDMGIEPFLLSSSLLGVLAQRLVRCLCPACKA--------------P 361
           LHTN A   +TR+  MG+  F +++++  ++AQRL R LC  CK               P
Sbjct: 418 LHTNSAAETLTRLHHMGVAAFNIATAINLIIAQRLARKLCSHCKKELDIPRETLIQEGFP 477

Query: 362 QTRPDGSVVYGPVGCAACGHSGFKGRTGIHELFVVHDDVRRLIHEGGDEQAMRAAAAKRG 421
           + +     VYGPVGC  C + G++GR GI+E+     ++ R+I E G+   +     K G
Sbjct: 478 EAKIGTFKVYGPVGCEHC-NGGYRGRVGIYEVVKKTPELERIIMEEGNSLEISRQMRKDG 536

Query: 422 MRSMREDGQRWVREGITTAEEILRVTRD 449
              +R  G     +GIT+ EE+ RVT+D
Sbjct: 537 FNDLRTSGLSKAMQGITSLEEVNRVTKD 564