Pairwise Alignments

Query, 401 a.a., General secretion pathway protein F from Variovorax sp. SCN45

Subject, 423 a.a., type II secretion system protein (RefSeq) from Shewanella sp. ANA-3

 Score =  187 bits (475), Expect = 5e-52
 Identities = 120/402 (29%), Positives = 212/402 (52%), Gaps = 11/402 (2%)

Query: 4   FEYEAASASGELQRGTTEGESARSVRAQLRDRGLTPLDIREKAAGGGALSWLSPRLGAAD 63
           FE++  +  G+   G   G SA  +R+QL+ +G+ P  +R+++A    L     ++   D
Sbjct: 26  FEWKGLNRDGQKTSGELRGASAAEIRSQLKSQGVNPKTVRKQSAALFKLG--DAKISPMD 83

Query: 64  LCWATRELASLLGARLTLEAALVATIEQAERKH----VAESLSAVCDSVRAGMRLADALG 119
           +   TR++A++L A + L    V TIE   R H    + E L ++   +++G+ L+D+L 
Sbjct: 84  IAMITRQIATMLAAGVPL----VTTIELLGRGHEKAKMRELLGSILSEIQSGIPLSDSLR 139

Query: 120 ERPRDFPQIYRALVSAGEDSGDLARVMERLADYLENRDNLRGKVLTAFIYPAIVGFVSLC 179
              R F  +Y  LV+AGE SG L  V +R+A Y E  + L+ K+  A  YPA V  V++ 
Sbjct: 140 PHRRYFDDLYVDLVAAGEHSGSLDVVFDRIATYREKSEALKSKIKKAMFYPAAVVVVAIL 199

Query: 180 IVVFLLGYVVPQVIGAFAQARQELPTITRVMLAASAFVREWGWLTAGVVVA-AWVAARAL 238
           +   LL +VVPQ    F     ELP  T+++L  S  ++   ++  G +VA  ++  RA 
Sbjct: 200 VTTLLLLFVVPQFEEIFKGFGAELPAFTQLVLHISRGLQSSWYIFLGAIVAGVFLFVRAH 259

Query: 239 LRDAAHKLKWHGLILRMPMVGRFALGVDTARFASTLSILMDAGVPLLRALEAARQTLVNE 298
                 + +    +L++P +G        ARFA TL+    AGVPL+  LE+A     N 
Sbjct: 260 RNSQMVRDRVDEAVLKIPAIGPILHKGAMARFARTLATTFAAGVPLIDGLESAAGASGNA 319

Query: 299 WLKRCVLEATGRVKEGTPLAAALKAQKIFPSNLVHLVASGEKTGALAAMFERAALNLSRD 358
             ++ +L+    V  G  +  A++   +FP  L+ +V  GE++G+L  M  + A      
Sbjct: 320 VYRKAILKIRQEVMAGMQMNVAMRTTGLFPDMLIQMVMIGEESGSLDNMLNKVANIYEMQ 379

Query: 359 LERRAMRLTTLLEPLMILAMGGVVMAIVLAVLMPIMEINQMV 400
           ++     L++L+EP+M++ +G VV  +++A+ +PI ++ ++V
Sbjct: 380 VDDAVDGLSSLIEPIMMVVIGTVVGGLIVAMYLPIFQMGKVV 421