Pairwise Alignments

Query, 248 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase (EC 2.1.1.185) from Variovorax sp. SCN45

Subject, 247 a.a., 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB from Vibrio cholerae E7946 ATCC 55056

 Score =  240 bits (612), Expect = 2e-68
 Identities = 130/248 (52%), Positives = 168/248 (67%), Gaps = 6/248 (2%)

Query: 3   SPKVIFGFHAVGVRIKTAPKSVLEVMFDASRRDARMKQFIARAQEAGVRLVEADGLRLSK 62
           S ++I+G HAV   ++  P   +E      R+D R+   +      GV + E     L  
Sbjct: 2   SNELIYGIHAVNAVLQRDPARFVEAYVLKGRQDDRLLPVLNELMRLGVSIQEMSRKALDD 61

Query: 63  LSGSHGHQGVVARVEPAAQIHS--LDELLEGLEEAGTVPLLLVLDGVTDPHNLGACLRVA 120
            +    HQG++ARV+PA Q++   LD++L   E+    PLLLVLDGVTDPHNLGACLR A
Sbjct: 62  KAEGANHQGLIARVKPARQLNENDLDDILAQHEQ----PLLLVLDGVTDPHNLGACLRNA 117

Query: 121 DGAGAHAVIAPKDHAAGINATVAKVASGAAETVPYFMVTNLARTLNELKERSIWCVGTSD 180
           D AG  AVI PKD +A + ATV+KVA GAAETVP   VTNLART+  L+E+ +W VGT+ 
Sbjct: 118 DAAGVAAVIVPKDKSAPLTATVSKVACGAAETVPLVRVTNLARTMRALQEKGVWFVGTAG 177

Query: 181 DAPGTIYQSDFKRPLALVLGAEGEGMRQLTRKTCDELVSIPMAGAVESLNVSVASGVCLY 240
           +A   IYQS     LA+V+GAEG+GMR+LTR+TCD+L+ IPMAG+V SLNVSVA GVCL+
Sbjct: 178 EATHDIYQSKLTGSLAIVMGAEGDGMRRLTRETCDDLIKIPMAGSVSSLNVSVACGVCLF 237

Query: 241 EAMRQRGA 248
           EA+RQR A
Sbjct: 238 EAVRQRMA 245