Pairwise Alignments

Query, 236 a.a., ABC-type antimicrobial peptide transport system, ATPase component from Variovorax sp. SCN45

Subject, 233 a.a., ABC transporter ATP-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  190 bits (483), Expect = 2e-53
 Identities = 104/226 (46%), Positives = 146/226 (64%), Gaps = 3/226 (1%)

Query: 9   IVAVEHVFKSVTDSAGTLDILQDIHFTLGARETAAIVGASGSGKSTLLSIIAGLDTPTRG 68
           +V ++ + K  T     +  L  +  T+   E  AI+G SGSGKSTL++++  LD PT G
Sbjct: 9   LVELQQICKHYTSGQNVVKALDGVDLTIRHGEFLAILGPSGSGKSTLMNVLGCLDKPTAG 68

Query: 69  TVRLAGDDLFAIDEDERAAVRAQRVGFVFQSFQLLGNLSALENVMLPLELAN--RKDARK 126
             +L G  + ++   + AA+R Q++GFVFQSF LL   SAL+NV LPL  A    KD R+
Sbjct: 69  RYQLDGHPVDSLSTQQLAAIRNQKIGFVFQSFNLLEYASALDNVALPLVYAGVKAKDRRR 128

Query: 127 AATEMLGRVGLGQRLGHYPKVLSGGEQQRVALARAFVVQPALLLADEPTGSLDFATGEQV 186
            ATE+L RVGL  RL H P  LSGG++QRVA+ARA + QP +LLADEPTG+LD  +G ++
Sbjct: 129 RATELLTRVGLADRLDHKPNQLSGGQKQRVAIARALINQPQILLADEPTGALDSKSGAEI 188

Query: 187 MKLMFDLNRELGTTLVLVTHDRGIADRCERRITIEAGRVAGNEKAA 232
             L  +L+RE G T+++VTHD  +A R +R +TI  G+V  +E  A
Sbjct: 189 EALFNELHRE-GRTIIVVTHDNELAKRTKRIVTIRDGQVVSDEPTA 233