Pairwise Alignments

Query, 330 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 451 a.a., histidine kinase from Vibrio cholerae E7946 ATCC 55056

 Score = 68.6 bits (166), Expect = 3e-16
 Identities = 83/339 (24%), Positives = 147/339 (43%), Gaps = 87/339 (25%)

Query: 16  QYVW-----------LSMASWCVLLSWLWKRIPRRRVLMWAALAAAMHLTPVTAQVIRAS 64
           QY+W           LS ++W  L  W W             +   +++  ++ +V +  
Sbjct: 147 QYLWRKPSSGETVPKLSYSAW--LDDWEWM------------IGTGLYIEDLSHEVEKMQ 192

Query: 65  SAITVMAHDMPVTFWALQALNVVVLCMIVSIWY---FSQRRVARGRLVQAVLA------- 114
           +A+     ++  TF+++  + +V + +I+ +       + R+A   L   V         
Sbjct: 193 AAVNA---NIDTTFFSVVVILIVTVAVIIVLTLAINLHEHRLADKNLKDLVHKTVLFQED 249

Query: 115 ERRRIANDLHDGVGSRLVA------LLASQ--DPKTAAAPDSLSMALQACLLELQMTVDD 166
           E++ +A +LHDG+   LV+      LLA+Q  DPK               ++ L+ +   
Sbjct: 250 EKKHLARELHDGINQLLVSSKCHLELLANQLNDPKQ--------------IVHLEKSQHS 295

Query: 167 LDDQTSATAVERLAHLRYRLRP-AFDRLGVTLA-------------WDISDAAHDQP--L 210
           L      TA+  +  + + LRP A D LG+  A              +I      QP  L
Sbjct: 296 L-----MTAINEVRRISHHLRPSALDDLGLQAALTTLLEDFKLHSQMEIEMLFDTQPGKL 350

Query: 211 PPETTMQICRVAQEALSNALRHSRATRVELHFGLQSSPRRLMLEVRDNGRGIGIGAAAGQ 270
             E    + RV QE+L+N  +H++A +V +   LQ     L L VRD+G    +G ++ +
Sbjct: 351 KSEVATTLYRVVQESLNNIEKHAKAEKVTVL--LQQMGDMLQLMVRDDG----VGFSSKE 404

Query: 271 PPERLGKGLRSMRARAEAIGGELVVADVAPQGLCVRLLV 309
             ++ G GLR+MR R E IGGE  ++     G  + +L+
Sbjct: 405 ALQKRGIGLRNMRERVEFIGGEFELSSEPQLGTEITVLL 443