Pairwise Alignments

Query, 330 a.a., hypothetical protein from Variovorax sp. SCN45

Subject, 792 a.a., PAS domain S-box from Dechlorosoma suillum PS

 Score = 63.9 bits (154), Expect = 1e-14
 Identities = 62/221 (28%), Positives = 95/221 (42%), Gaps = 49/221 (22%)

Query: 115 ERRRIANDLHDGVGSRLVALLASQDPKTAAAPDSLSMALQACLLELQMTVDDLDDQTSAT 174
           ER RI+ ++HD +G  L  L                  L+   L  ++     +++T   
Sbjct: 583 ERSRISLEIHDQLGQSLTVL-----------------KLEMAWLRARLLGGQAEEKTRLQ 625

Query: 175 AVERLAH--------LRYRLRPAF-DRLGVT--LAWDISD-------------AAHDQPL 210
            V RL          + + LRP   D LG+   + W + D                   L
Sbjct: 626 EVGRLIDDTLRAVRTISWDLRPGILDTLGLGAGVEWLVDDFRRRLGIRCNVVVPRERLEL 685

Query: 211 PPETTMQICRVAQEALSNALRHSRATRVELHFGLQSSPRRLMLEVRDNGRGIGIGAAAGQ 270
           P      + R+ QE L+N  RH++A R+++  GL     R++LEVRDNGRG+ +  A G 
Sbjct: 686 PDVLATHLFRICQELLTNVARHAQANRIDVSLGLADG--RVLLEVRDNGRGMPMLPAHGH 743

Query: 271 PPERLGKGLRSMRARAEAIGGELVVADVAP-QGLCVRLLVP 310
                  GL  ++ RA   GGE+ +A     +G  VR+LVP
Sbjct: 744 -----SLGLLGIKERAAQCGGEVHIATRPEIEGTRVRVLVP 779