Pairwise Alignments

Query, 271 a.a., shikimate dehydrogenase from Variovorax sp. OAS795

Subject, 287 a.a., shikimate 5-dehydrogenase (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 81.3 bits (199), Expect = 2e-20
 Identities = 75/255 (29%), Positives = 113/255 (44%), Gaps = 16/255 (6%)

Query: 11  FGILADPIHHVKTP----QGINRLLDARSFDGVMVPIHVGAEGLAAMVDGLRRMRNLGGF 66
           + +   PI H K+P    Q      ++ +++ ++ PI    +G  A +         G  
Sbjct: 11  YAVFGHPIGHSKSPFIHGQFAALTQESLTYEAILAPI----DGFEASLKSFFSSGGKGAN 66

Query: 67  VVTVPHKTAMPALCDELTPAARRIGAVNVVRRSAEGRLSGGMLDGEGFVGGLRSAGIEPA 126
           V TVP K    ALCD L+  A   GAVN +   A+G + G   DG G V  L S      
Sbjct: 67  V-TVPFKEQAFALCDSLSAEAALAGAVNTLSLLADGSIRGDNTDGLGLVADLISHLGSLQ 125

Query: 127 GLSAYLAGAGGAASAIAYALAQAGISRLTIANRTPAKARELI---ARLQEDFPGVPMQ-- 181
                L GAGGAA      L  AG+ +L I NRT  KA++L+   ++L+E      +Q  
Sbjct: 126 HKRVLLVGAGGAARGCILPLLNAGVGQLVITNRTQTKAKDLVDIFSQLEEGIYKDKLQAL 185

Query: 182 PGSDDPSQHDLVVNGTSLGLRDGDALPLDSERLSVDQIVAEIVMQPAETPLLRAARAKG- 240
             S+   + +LV+N TS  L  G+  PL    +    +  +++     T   + A  +G 
Sbjct: 186 SMSELTGEFELVINSTSASLA-GELPPLPQSIIGSTTVCYDMMYGAMPTAFNQWALQQGA 244

Query: 241 CRVHFGAPMLASQVA 255
            +V  G  ML  Q A
Sbjct: 245 AKVIDGLGMLVGQAA 259