Pairwise Alignments

Query, 271 a.a., shikimate dehydrogenase from Variovorax sp. OAS795

Subject, 301 a.a., shikimate 5-dehydrogenase (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 94.4 bits (233), Expect = 3e-24
 Identities = 82/249 (32%), Positives = 117/249 (46%), Gaps = 14/249 (5%)

Query: 9   RIFGILADPIHHVKTPQGINRLLDARSFDGVMVPIHVGAEGLAAMVDGLRRMRNLGGFVV 68
           R++GI+  P+ H  +P   N      S   V +   V     A+ ++ +R +  + G  V
Sbjct: 35  RLYGIVGHPLGHTLSPLLHNWGFALHSLPAVYMAWPVPPGRFASFMEAVRTLP-VHGASV 93

Query: 69  TVPHKTAMPALCDELTPAARRIGAVNVVRRSAEGRLSGGMLDGEGFVGGLRSAGIEPAGL 128
           T+PHK     LCD +T  AR +GAVN +    +G + G   D  GF+  LR+ G+     
Sbjct: 94  TIPHKEEALRLCDRVTDRARAVGAVNTLFLE-DGVVCGENTDVTGFLAPLRARGVRID-- 150

Query: 129 SAYLAGAGGAASAIAYALAQAGISRLTIANRTPAKARELIARLQEDFPGVPM-QPGSDDP 187
            A + GAGGAA A+   L + G+ R+ I+NRT  KA EL      D   VP  + GS   
Sbjct: 151 EALVLGAGGAARAVLAGLVELGVRRVRISNRTHDKAMELAGAFGADV--VPWDERGS--- 205

Query: 188 SQHDLVVNGTSLGL---RDGDALPLDSERLSVDQIVAEIVMQPAETPLLRAARAKGCRVH 244
           +   LVVN T  G+   R G++ PL     S   +  ++V  P  T  L  ARA G    
Sbjct: 206 AAAGLVVNTTPCGMQGARMGES-PLPEGAFSGRGMAYDLVYNPLTTRFLADARAAGWETQ 264

Query: 245 FGAPMLASQ 253
            G  M   Q
Sbjct: 265 DGLGMFVEQ 273