Pairwise Alignments

Query, 323 a.a., TRAP transporter substrate-binding protein from Variovorax sp. OAS795

Subject, 338 a.a., TRAP dicarboxylate transporter- DctP subunit (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  162 bits (411), Expect = 8e-45
 Identities = 95/292 (32%), Positives = 158/292 (54%), Gaps = 5/292 (1%)

Query: 11  VLGMGMACAAFAQTTMKISISTAQNSHQGVAIDVFAKEVEKRTGGRYKVQTFYNGALGGE 70
           ++ MG+A A       KI++  +  S Q      F + +E+ +GG +    F NG LG E
Sbjct: 19  IMSMGVADAK----NFKIAVGDSGGSSQEATGLAFVEALEELSGGEHTGTLFLNGQLGSE 74

Query: 71  RESIEAVQLGTQELALSSTGPVPNFVPETKILDVPFLFRDKAHARAVLDGPIGQDLLTK- 129
           ++++    +GT ++++ +   V  F P   +  +P++      A  +  GPIG +L    
Sbjct: 75  QDTVNEAAIGTLDMSILAINNVTPFSPTVGVFSLPYVILSLEDAEKLTQGPIGAELTENT 134

Query: 130 FDAKGFKALAWAENGFRHMTNSKRDVKAPEDLKGLKMRTMENPVHIAAYKSFGIVTTPMA 189
            +  G + +AW   GFR +TNSK+ V +  DL+GL +R  +N + I  YK++GI  TPMA
Sbjct: 135 INDAGVRIIAWTYTGFRRLTNSKQPVTSVADLQGLVIRVPKNEIMIDTYKAWGISPTPMA 194

Query: 190 FPEVFTALQQGTVDGQENPLSVIIAAKFDQVQKHLSLTGHVYSPCIFLMNKASFDKLSAA 249
           + E F  LQ   VDGQ+NP   I A KF +VQK+++   +++S    ++++  F +LSA 
Sbjct: 195 WSETFAGLQTQVVDGQDNPYITINAMKFYEVQKYVTNLRYIFSIEPLIISEQVFQELSAE 254

Query: 250 DKQAFLEAAKEGTKANRARVDEDDAKGVADLRAKGMTVIDNVDKSKFVAALA 301
           D++  LEA K  T A+   + E +A+    L  KGM ++D V+  +    LA
Sbjct: 255 DQEIVLEAGKRATAASSQFLREKEAEIKELLIEKGMEIMDPVNNEEEFITLA 306