Pairwise Alignments

Query, 479 a.a., cytochrome-c oxidase, cbb3-type subunit I from Variovorax sp. OAS795

Subject, 478 a.a., cytochrome c oxidase, cbb3-type, subunit I (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  756 bits (1952), Expect = 0.0
 Identities = 349/479 (72%), Positives = 407/479 (84%), Gaps = 3/479 (0%)

Query: 1   MQPSNPPAAAYDDTVVRQFALMSVVWGVVGMLVGVIIASQLAWPELNLGIPWLSYGRLRP 60
           M  S P  A Y+ T+VRQFAL +V+WG+VGM VGV+IA+QL WP LN   PW +Y RLRP
Sbjct: 2   MNHSQPTGADYNYTIVRQFALTTVLWGIVGMSVGVLIAAQLIWPHLNFDTPWFTYSRLRP 61

Query: 61  LHTNAVIFAFGGCALMATSFHVVQRTCQVRLFAPALASFVFWGWQAVIVAAAISLPLGYT 120
           LHTNAVIFAFG  AL ATS++VVQRTCQ RLFAP LA+F FWGWQA+I++AAI+LP+GYT
Sbjct: 62  LHTNAVIFAFGTSALFATSYYVVQRTCQTRLFAPKLAAFTFWGWQAIILSAAITLPMGYT 121

Query: 121 TGKEYAELEWPIDILIAAVWVSYAVVFFGTIGVRKVRHIYVANWFFGAFIIAVALLHIVN 180
           +GKEYAELEWPIDI I  VWVSYA+VFFGTI  R   HIYVANWFFGAFII VA+LHIVN
Sbjct: 122 SGKEYAELEWPIDIAITIVWVSYAIVFFGTIIKRTTSHIYVANWFFGAFIITVAVLHIVN 181

Query: 181 SAEIPAGWMKSYSAYAGVQDAMVQWWYGHNAVGFFLTAGFLGMMYYYIPKQAGRPVYSYR 240
           S  +P    KSYS Y+G  DAMVQWWYGHNAVGF LTAGFLGMMYY++PKQAGRPVYSYR
Sbjct: 182 SMAVPVSLFKSYSMYSGAVDAMVQWWYGHNAVGFLLTAGFLGMMYYFVPKQAGRPVYSYR 241

Query: 241 LSIVHFWALIFTYMWAGPHHLHYTALPDWTQSLGMVFSLILLAPSWGGMINGVMTLSGAW 300
           LSIVHFWALI  Y+WAGPHHLHYTALPDWTQSLGMV SLIL APSWGGMING+MTLSGAW
Sbjct: 242 LSIVHFWALIALYIWAGPHHLHYTALPDWTQSLGMVMSLILFAPSWGGMINGIMTLSGAW 301

Query: 301 HKLRTDPILRFLIVALSFYGMATFEGPLMSIKTVNALSHYTDWTVGHVHAGALGWVGFIT 360
           HKLRTDP+LRFL+V+LSFYGM+TFEGP+M+IKTVNALSHYTDWTVGHVH+GALGWV  ++
Sbjct: 302 HKLRTDPVLRFLVVSLSFYGMSTFEGPMMAIKTVNALSHYTDWTVGHVHSGALGWVAMVS 361

Query: 361 MGSLYYLVPRMYGRTEMYSVKAIDAHFWIATIGIVLYIAAMWIAGVMQGLMWRAINPDGT 420
           +GSLY+L+P ++G   MYS+K ++ HFW+ATIG VLYI +MWI+GVMQGLMWRA+N DGT
Sbjct: 362 IGSLYHLIPVLFGHGRMYSIKLVNVHFWLATIGTVLYIVSMWISGVMQGLMWRAVNADGT 421

Query: 421 LTYTFVESVKATYPFYVVRLAGGLLYLGGMLVMAWNVWMTVISGRSVQASIPPVAVAHA 479
           LTY+FVES++A+YPFY VR  GG  +L GML+MA+NV  TV   ++ + S+P +A A A
Sbjct: 422 LTYSFVESLEASYPFYFVRFLGGCFFLTGMLIMAYNVIRTV---KASKDSLPALAEAKA 477