Pairwise Alignments

Query, 246 a.a., response regulator transcription factor from Variovorax sp. OAS795

Subject, 241 a.a., transcriptional regulatory protein OmpR (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  181 bits (459), Expect = 1e-50
 Identities = 99/236 (41%), Positives = 147/236 (62%), Gaps = 9/236 (3%)

Query: 7   IAVLDDEVDITQLLANYLQSHGFRVTQLHNGASLMALMGTDPADLVLLDLGLPGEDGFSI 66
           I V+DD++ +  LL  YL   G++V    N   +  L+  +   L++LDL LPGEDG SI
Sbjct: 8   ILVVDDDMRLRALLERYLMEQGYQVRSAANAEQMDRLLERENFHLIVLDLMLPGEDGLSI 67

Query: 67  ARRMRENWRC-GLVIVTGRGDAVDKVVGLEVGADDYVTKPFDLRELVARVKAVLRRMAPA 125
            RR+R+      +V++T +GD VD+++GLE+GADDY+ KPF+ REL+AR+KAV+RR    
Sbjct: 68  CRRLRQQGSTIPIVMLTAKGDEVDRIIGLELGADDYLPKPFNPRELLARIKAVMRRQTQ- 126

Query: 126 DAVDATVAASPVPPSADKLRFAGWLLDIAARSLTNPQGQAVALTGGEFDLLSAFARHPGR 185
                 V  +P    A+ +RF  + LD+A R + +   +A+ LT GEF +L     HP  
Sbjct: 127 -----DVPGAPAQQEAE-IRFGEFSLDLATREMYHGD-EAIVLTSGEFAVLKVLVTHPRE 179

Query: 186 VLSRDFLLEQTRGREAAPFDRTVDVQVGRLRKKIEADADDPQIIKSVRGAGYILVP 241
            LSRD L+   RGR+ +  +R++DVQV RLR+ IE D  +P+ I++V G GY+ VP
Sbjct: 180 PLSRDKLMNLARGRDYSALERSIDVQVSRLRRLIEKDPANPRYIQTVWGLGYVFVP 235