Pairwise Alignments

Query, 347 a.a., dipeptide ABC transporter ATP-binding protein from Variovorax sp. OAS795

Subject, 335 a.a., peptide ABC transporter ATP-binding protein from Herbaspirillum seropedicae SmR1

 Score =  290 bits (743), Expect = 3e-83
 Identities = 150/301 (49%), Positives = 197/301 (65%), Gaps = 9/301 (2%)

Query: 23  RGMFRAATQLRAVGDISFRIDRGRTLAVVGESGCGKSTLARMVALIEKPTAGQLTLVGHD 82
           RG  R      A+  +  ++  G  + +VGESGCGKSTL R+   +  P+ GQ+ + G D
Sbjct: 33  RGWSRPPAITHALDKVDLKVLPGEVVGLVGESGCGKSTLGRVACGLLDPSDGQVLVNGRD 92

Query: 83  AVSTPPEHRRELRQAVQLVFQNPYGSLNPRKKISTVLEDPLAINTTLGKTQRA--DKARE 140
             S       E R  VQ++FQNPY SLNPR +I  ++ +   +N   GK +    D   +
Sbjct: 93  RASLSSREEAEARLQVQMIFQNPYASLNPRLRIDQIVGEAAQVN---GKVEGDLDDYVCQ 149

Query: 141 MLARVGLRPEHANRYPHMFSGGQRQRIAIARALMLEPRLLVADEPVSALDVSIQAQVLNL 200
            L R GL P   +RYPH FSGGQRQRI IARAL ++P++LV DE V+ALDVSIQAQ+LNL
Sbjct: 150 QLLRAGLDPALRDRYPHQFSGGQRQRIGIARALAVQPQMLVCDEAVAALDVSIQAQILNL 209

Query: 201 LADLQAELGLAYLFISHDLGVVRHIAHDVLVMYLGHAVEQGPKSRIFARPLHPYTQALLA 260
             DL+AELGL YLFISHDLGVV H++  V++MYLG  VE  P + +F +P HPYTQALLA
Sbjct: 210 FMDLRAELGLTYLFISHDLGVVEHVSDRVVIMYLGRVVESAPVAELFGQPNHPYTQALLA 269

Query: 261 STPGLSSQR---IVLKGELPSPLDPPSGCVFSTRCSHVTARCREERPLLRAL-DERLVAC 316
             P + +++     +KGE+PSPL+PP+GC F+ RC H T RCREE+PLLR +    + AC
Sbjct: 270 EVPRMGARKKEFTAIKGEIPSPLNPPTGCHFNPRCPHATQRCREEQPLLREIAPGHMSAC 329

Query: 317 H 317
           H
Sbjct: 330 H 330