Pairwise Alignments

Query, 309 a.a., branched-chain amino acid ABC transporter permease from Variovorax sp. OAS795

Subject, 301 a.a., branched-chain amino acid ABC transporter, permease protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  143 bits (361), Expect = 4e-39
 Identities = 99/311 (31%), Positives = 165/311 (53%), Gaps = 18/311 (5%)

Query: 4   FLETLFGGLMVGMLYSLIAIGFVLIYKASGVFNFAQGAMVLFAALAMARFAEWFPLWF-G 62
           FL+ L  GL VG +Y+LIA+G+ ++Y    + NFA G   LF   A   F  +  L   G
Sbjct: 4   FLQQLTNGLAVGGIYALIALGYTMVYGVLKLINFAHGD--LFTIGAYLGFTVFAALGLSG 61

Query: 63  FQSQVLANILAFVAAMGVMVIVAWLIERLALSKLVNQEGITLLMATLGIAYFLDGVGQTI 122
             S  +A +L     MG++ ++ +L+ER+A   L +   ++ +++ LG + F       I
Sbjct: 62  HVSGAVAVLLVTTMVMGLVALIGYLLERVAYRPLRSSSRLSAVVSALGASIFFQNAVMLI 121

Query: 123 FGN--DIYKIDVGMPKEPLMVLQGTFPGGLLLSQEDLVAALVSAGLVVVLAIFFQKTATG 180
           +G    +Y  D+     P M +      G+ +    ++    S  L+++L  F  +T TG
Sbjct: 122 YGAKFQVYPNDI----RPTMAVSFF---GMDIPLVRIMMFGASVALMLLLHFFIHRTRTG 174

Query: 181 RALRAVADDHQAAQSIGIPLKRIWVIVWSVAGFSALVAGVIWGSKLG-VQFSLSLV-ALK 238
            A+RAVA D  AA+ +GI + R+  +V+ +       AGV+ G   G + F++  V  LK
Sbjct: 175 TAIRAVAIDQGAAKLMGIDVNRVIALVFMIGPALGGAAGVMVGLYYGQIDFTMGWVYGLK 234

Query: 239 ALPVVILGGLTSIPGAIIGGLLIGVGEKLSEIYLGPMLGGGIEIWFAYVLALVFLLVRPQ 298
           A    ILGG+ +IPGA++GGLL+GV E L   Y+       I    A+++ ++ L++RP 
Sbjct: 235 AFTAAILGGIGNIPGAMVGGLLLGVIEALGAAYISIAWKDAI----AFLVLILILIIRPT 290

Query: 299 GLFGEKIIDRV 309
           GL GE++ D++
Sbjct: 291 GLLGERVADKI 301