Pairwise Alignments

Query, 474 a.a., efflux transporter outer membrane subunit from Variovorax sp. OAS795

Subject, 474 a.a., RND efflux system, outer membrane lipoprotein CmeC from Pseudomonas fluorescens FW300-N2E2

 Score =  426 bits (1094), Expect = e-123
 Identities = 241/474 (50%), Positives = 317/474 (66%), Gaps = 9/474 (1%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAPPVPTTFPGDPAQPAGPAA--AAVP--WEDF 56
           MT+ LI  A+ AA+L +GCSLIP Y+RP  PV   +P  PA  A  AA  AAV   W +F
Sbjct: 1   MTRSLIGLAITAAVL-SGCSLIPEYQRPQAPVAAHYPQGPAYQAANAADQAAVEQGWREF 59

Query: 57  FTDARLNGLIRTALENNRDLRVSVLNIEQARAQFQIQRSSLFPAVGVTGSGSRSSPNPYQ 116
           F D  L  LI+TAL NNRDL+V+ LN+E  RAQ++IQR+ LFPA+G   SG+R      Q
Sbjct: 60  FHDPALQRLIQTALINNRDLKVAALNVEAYRAQYRIQRADLFPAIGANASGTRQRLPSAQ 119

Query: 117 AFDSSVGSVSQQYSVNLGITAWEIDFFGRIRALKDQALAQYLATEESRKAAQVSLIAAVA 176
           +      S+S QY VNLGI+++E+D FGRI +L  QAL  YL+T ++R++AQ+S++++VA
Sbjct: 120 S-QPGQPSISSQYDVNLGISSYELDLFGRIASLSQQALETYLSTAQARRSAQISIVSSVA 178

Query: 177 TGWLTLIADDELLELTRQTLVTREESVRLTKLRFDNGVSSELDFQAANSLAETARASYAQ 236
             +LT  AD ELL+LT  TL T EES+RLT      GV S LD   A +  + ARAS A 
Sbjct: 179 NAYLTWQADRELLKLTENTLGTYEESLRLTTRSNQVGVVSALDLAQARTSVQGARASLAN 238

Query: 237 QQRARMQDENALALLLGAPVPASATAGGVKGLDSVQPMPDVPAGLPSDLLAERPDIRAAE 296
            QR   +DENAL LLLG  +PA       + LD    + +VPAGLPSDLL  RPDI AAE
Sbjct: 239 YQRRVAEDENALVLLLGTGLPADLPEP--QSLDG-DLLANVPAGLPSDLLVRRPDILAAE 295

Query: 297 QQLIGANANIGAARANFFPRVSLTTTLGTVSSEFSGLFDSGSKAWSFAPSITLPIFDAGR 356
             L+ ANANIGAARA FFP +SLT   GT S+   GLF S S +W+F+P+I+LPIF+AG 
Sbjct: 296 HSLLAANANIGAARAAFFPSISLTANAGTSSANLDGLFKSSSGSWAFSPTISLPIFNAGA 355

Query: 357 NRATLDSARAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRAQRAQAEAEAVRFRL 416
            RA+LD ++  ++I VA YEK+IQTAF+EV+D L  R T  +Q++AQ+    A    ++L
Sbjct: 356 LRASLDYSKIQKDIGVANYEKAIQTAFQEVSDGLTARKTYVDQLQAQKDLVNASQDYYQL 415

Query: 417 SDMRYRNGIASALDLLDAQRSLYTAQQSAVTTRLLQLQNQVTLYKTLGGGWATR 470
           ++ RYR G+ S L  LDAQRSL+++QQ  +  RL QLQ +V+LY+ LGGGW  R
Sbjct: 416 AERRYRIGVDSHLTFLDAQRSLFSSQQGLINDRLAQLQAEVSLYRALGGGWNER 469