Pairwise Alignments

Query, 474 a.a., efflux transporter outer membrane subunit from Variovorax sp. OAS795

Subject, 485 a.a., multidrug transporter from Pseudomonas fluorescens FW300-N2C3

 Score =  444 bits (1142), Expect = e-129
 Identities = 246/477 (51%), Positives = 317/477 (66%), Gaps = 10/477 (2%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAPPVPTTFPGDPAQPA----GPAAAAVPWEDF 56
           M+K L+   +AA ++L+GCSLIP Y+RP  PV   +P  PA  A    G AAA   W+ F
Sbjct: 1   MSKSLLSLTIAA-VVLSGCSLIPDYQRPEAPVAAQYPQGPAYEAANAPGQAAAEQGWKQF 59

Query: 57  FTDARLNGLIRTALENNRDLRVSVLNIEQARAQFQIQRSSLFPAVGVTGSGSRSSPNPYQ 116
           F D  L  LI+ ALENNRDLRV+ LNI+   AQ++IQR+ LFPAV  TGSGSR    P +
Sbjct: 60  FHDPALQQLIQVALENNRDLRVAALNIDAYAAQYRIQRADLFPAVSATGSGSRQRV-PAR 118

Query: 117 AFDSSVGSVSQQYSVNLGITAWEIDFFGRIRALKDQALAQYLATEESRKAAQVSLIAAVA 176
           A  +   ++S  YS  LGI+A+E+D FGR+R+L +QAL  Y ATEE+R++ Q+SL+A VA
Sbjct: 119 ASQTGEAAISSSYSATLGISAYELDLFGRVRSLSEQALQSYFATEEARRSTQISLVANVA 178

Query: 177 TGWLTLIADDELLELTRQTLVTREESVRLTKLRFDNGVSSELDFQAANSLAETARASYAQ 236
             +LT  AD ELL+LT++TL   E+S +LT    + GV+S LD   A +  E AR   A+
Sbjct: 179 NAYLTWQADKELLKLTQETLGAYEQSFKLTSRSAEVGVASALDLSQARTAVENARVQLAR 238

Query: 237 QQRARMQDENALALLLGAPVPASATAGGVKGLDSVQPMPDVPAGLPSDLLAERPDIRAAE 296
             R   QDEN+L LLLG  +PA+  +  +    S   + +VPAGLPSDLL  RPDI  AE
Sbjct: 239 YTRQVAQDENSLTLLLGTGLPANLNSQPL----SDDLLSEVPAGLPSDLLQRRPDILQAE 294

Query: 297 QQLIGANANIGAARANFFPRVSLTTTLGTVSSEFSGLFDSGSKAWSFAPSITLPIFDAGR 356
           + L+ ANANIGAARA FFP +SLT   GT+S + SGLF  GS  W+FAP I LPIF+AG 
Sbjct: 295 RNLLAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWTFAPQINLPIFNAGS 354

Query: 357 NRATLDSARAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRAQRAQAEAEAVRFRL 416
            RA+LD A+  ++I VAQYEKSIQTAF+EV+D LA R T  EQ++AQ     A    +RL
Sbjct: 355 LRASLDYAKIQKDINVAQYEKSIQTAFQEVSDGLAARQTYNEQLQAQTDFVAANQDYYRL 414

Query: 417 SDMRYRNGIASALDLLDAQRSLYTAQQSAVTTRLLQLQNQVTLYKTLGGGWATRDSK 473
           ++ RYR G+ S L  LDAQR L++AQQS +T RL QL ++V LYK LGGGW     K
Sbjct: 415 AERRYRIGVDSNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGWNAETGK 471