Pairwise Alignments

Query, 474 a.a., efflux transporter outer membrane subunit from Variovorax sp. OAS795

Subject, 486 a.a., multidrug transporter from Pseudomonas fluorescens FW300-N2E3

 Score =  446 bits (1148), Expect = e-130
 Identities = 249/482 (51%), Positives = 320/482 (66%), Gaps = 19/482 (3%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAPPVPTTFPG----DPAQPAGPAAAAVPWEDF 56
           M+K L+  A+AA  +L GCSLIP Y++PA P+ + +P      PAQ A  AAA   W+ F
Sbjct: 1   MSKSLLSLAIAA-FVLGGCSLIPDYQQPAAPIASQYPQGPAYSPAQAANQAAAEQGWKQF 59

Query: 57  FTDARLNGLIRTALENNRDLRVSVLNIEQARAQFQIQRSSLFPAVGVTGSGSRSSPNPYQ 116
           F D  L  LI+TALENNRDLRV+ LNI+   AQ++I R+ LFPAV  TG+GSR    P +
Sbjct: 60  FRDPALQQLIQTALENNRDLRVAALNIDAFAAQYRISRADLFPAVSATGTGSRQRI-PAR 118

Query: 117 AFDSSVGSVSQQYSVNLGITAWEIDFFGRIRALKDQALAQYLATEESRKAAQVSLIAAVA 176
           A  +   S+S  YS  +G++A+E+D FGR+R+L +QAL  Y ATEE+R++ Q+SL+A+VA
Sbjct: 119 ASQTGKESISASYSATVGVSAYELDLFGRVRSLNEQALQNYFATEEARRSTQISLVASVA 178

Query: 177 TGWLTLIADDELLELTRQTLVTREESVRLTKLRFDNGVSSELDFQAANSLAETARASYAQ 236
             +LT  AD E L+L++ TL T EES RLT    + GV+S LD   + +  ETAR   A+
Sbjct: 179 NAYLTWQADKEQLKLSQDTLATFEESYRLTARSNEVGVASALDLSQSRTAVETARVQQAK 238

Query: 237 QQRARMQDENALALLLGAPVPASATAGGVKGLDSVQPMPD-----VPAGLPSDLLAERPD 291
             R   QDEN+LALLLG  VPA+  AG        QP+ D     VPAGLPSDLL  RPD
Sbjct: 239 FTRLVAQDENSLALLLGTGVPANLAAG--------QPLSDDLLSEVPAGLPSDLLQRRPD 290

Query: 292 IRAAEQQLIGANANIGAARANFFPRVSLTTTLGTVSSEFSGLFDSGSKAWSFAPSITLPI 351
           I  AE +L  ANANIGAARA FFP +SLT   GT+S + SGLF  GS  W F P I LPI
Sbjct: 291 ILEAEHKLKAANANIGAARAAFFPSISLTANAGTLSPDLSGLFKGGSGTWLFQPQINLPI 350

Query: 352 FDAGRNRATLDSARAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRAQRAQAEAEA 411
           F+AG   A+LD ++  ++I +AQYEKSIQTAF+EV+D LA R T  EQ++AQR    A  
Sbjct: 351 FNAGSLSASLDYSKIQKDITIAQYEKSIQTAFQEVSDGLAARLTFNEQLQAQRDLVAANQ 410

Query: 412 VRFRLSDMRYRNGIASALDLLDAQRSLYTAQQSAVTTRLLQLQNQVTLYKTLGGGWATRD 471
             +RL++ RYR G+ S L  LDAQR L+TAQQS +T RL QL ++V LYK LGGGW  + 
Sbjct: 411 NYYRLAERRYRIGVDSNLTFLDAQRQLFTAQQSLITDRLSQLISEVNLYKALGGGWNAQT 470

Query: 472 SK 473
           +K
Sbjct: 471 AK 472