Pairwise Alignments

Query, 474 a.a., efflux transporter outer membrane subunit from Variovorax sp. OAS795

Subject, 486 a.a., RND efflux system, outer membrane lipoprotein, NodT from Pseudomonas syringae pv. syringae B728a

 Score =  442 bits (1138), Expect = e-129
 Identities = 250/474 (52%), Positives = 319/474 (67%), Gaps = 9/474 (1%)

Query: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAPPVPTTFPGDPA----QPAGPAAAAVPWEDF 56
           M+K LI  A+ A  +L GCSLIP Y++P  PV   +P  PA    + A  AAA   W  F
Sbjct: 1   MSKSLISLAVTA-FILGGCSLIPDYKQPQAPVAAQYPQGPAYSPVEGAKMAAAEQGWRHF 59

Query: 57  FTDARLNGLIRTALENNRDLRVSVLNIEQARAQFQIQRSSLFPAVGVTGSGSRSSPNPYQ 116
           F D  L  LI+TAL NNRDLRV+ LNI+  RAQ++IQRS LFPAV  TGSGSR      Q
Sbjct: 60  FNDPALQQLIQTALLNNRDLRVAALNIDAYRAQYRIQRSDLFPAVSATGSGSRQRVPGDQ 119

Query: 117 AFDSSVGSVSQQYSVNLGITAWEIDFFGRIRALKDQALAQYLATEESRKAAQVSLIAAVA 176
           +     G ++  YS  LG++++E+D FGR+R+L +QAL  Y A+EE+R++ Q+SL+A+VA
Sbjct: 120 SQTGQPG-ITSSYSATLGVSSYELDLFGRVRSLSEQALETYFASEEARRSTQISLVASVA 178

Query: 177 TGWLTLIADDELLELTRQTLVTREESVRLTKLRFDNGVSSELDFQAANSLAETARASYAQ 236
             ++T  AD ELL+LT+ TL T EES RLT    + GVSS LD   + +  E+ARA  AQ
Sbjct: 179 NAYMTWQADKELLKLTQDTLKTYEESFRLTSRASEVGVSSALDLSQSRTAVESARAKLAQ 238

Query: 237 QQRARMQDENALALLLGAPVPASATAGGVKGLDSVQPMPDVPAGLPSDLLAERPDIRAAE 296
            QR   QD+N+L LLLG  +P +  A  +  LDS   + ++PAGLPSDLL  RPDI  AE
Sbjct: 239 YQRLVAQDQNSLVLLLGTSLPDNLPASHL--LDS-DMLTEMPAGLPSDLLQRRPDILEAE 295

Query: 297 QQLIGANANIGAARANFFPRVSLTTTLGTVSSEFSGLFDSGSKAWSFAPSITLPIFDAGR 356
             L  ANANIGAARA FFP +SLT + GT SSE SGLF  GS AW F PSI +PIF+AG 
Sbjct: 296 HSLKAANANIGAARAAFFPSISLTASAGTSSSELSGLFKGGSGAWLFQPSINIPIFNAGN 355

Query: 357 NRATLDSARAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRAQRAQAEAEAVRFRL 416
            RA+LD ++  +EI+VA YEK+IQTAF+EV+D LA R T  EQ++AQR    A    +RL
Sbjct: 356 LRASLDYSKIQKEISVANYEKAIQTAFQEVSDGLASRKTYDEQLQAQRDFVAANQDYYRL 415

Query: 417 SDMRYRNGIASALDLLDAQRSLYTAQQSAVTTRLLQLQNQVTLYKTLGGGWATR 470
           ++ RYR GI S L  LDAQRSL++AQQ+ +T RL QL ++V LYK LGGGW  R
Sbjct: 416 AERRYRIGIDSNLTFLDAQRSLFSAQQTLITDRLSQLTSEVNLYKALGGGWYER 469