Pairwise Alignments

Query, 1053 a.a., efflux RND transporter permease subunit from Variovorax sp. OAS795

Subject, 1043 a.a., multidrug efflux RND transporter permease subunit from Rhodopseudomonas palustris CGA009

 Score = 1156 bits (2990), Expect = 0.0
 Identities = 595/1038 (57%), Positives = 763/1038 (73%), Gaps = 1/1038 (0%)

Query: 1    MAKFFIDRPIFAWVIALFVLVMGGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS 60
            MA FFI RPIFAWV+A+F+ + G +A+  LP++QYP +APP+I I   YPGAS Q L   
Sbjct: 1    MASFFIARPIFAWVVAIFICLAGVLALPFLPVAQYPIIAPPSISIATVYPGASTQNLYYG 60

Query: 61   VLSVIEREMNGSPGLIYMESVAQADGSGTITISFEAGTNDDLAQVDVQNRLSRATPRLPA 120
            V  +IE E+NG+ G++  ES +   G   I  SF+ GT+   A VDVQNR+ R  PRLP 
Sbjct: 61   VTRLIEEELNGAAGILSYESTSDTTGEVEIVASFQPGTDIAQATVDVQNRIKRIEPRLPE 120

Query: 121  AVTQQGVRVDKARNNFLMFVMLSSDNPAFDPVALGDYTARNIVPELQRVIGVGQAQLFGS 180
            AV ++G+ + +A +  L FV L+S + + D + LGD   R ++PEL+R+ GVG+ +LF +
Sbjct: 121  AVRKEGIAITEASSAILQFVTLTSSDNSLDEIGLGDVATRYVLPELRRLRGVGRVRLFST 180

Query: 181  ENAMRIWIDPAKLQGYALSATDVNNAIRAQNAQVSSGTLGDLPNIPGQAIAATVVVNGQL 240
            E AMRIW+DP KL G  L+A DV++AI AQNA V+SG LG  P    Q +   V+V GQL
Sbjct: 181  ERAMRIWLDPDKLLGLGLTAQDVDSAIAAQNAPVASGLLGVQPTPVQQRLQNMVLVKGQL 240

Query: 241  ANVEQFKNIVLRANTNGSTVRLKDVARVELGGQSYATSARLNGVPAVGIGVQPTPNGNAL 300
             ++E+F +IVLRAN NGSTVRL DVAR+E+GG +Y+ S RL+G PA  + VQ  P+GNAL
Sbjct: 241  DSLEEFGDIVLRANPNGSTVRLADVARLEVGGLAYSFSTRLDGRPAAAVAVQLAPSGNAL 300

Query: 301  QSAKAIRAKMAELERFFPPGVKWDIPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ 360
             +++A++A+MAEL  FFPPGVK+++ YD +  +  S+ +V+ TL EAV LVF+VMFLFLQ
Sbjct: 301  ATSEAVKARMAELAAFFPPGVKYEVSYDVTPVIAASVKKVLLTLAEAVVLVFLVMFLFLQ 360

Query: 361  NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM 420
            N RYT+IPTIVVPIALLGT A LL LGFSINVLTMFGMVL IGI+VDDAIVVVENVERIM
Sbjct: 361  NIRYTMIPTIVVPIALLGTCAVLLGLGFSINVLTMFGMVLAIGILVDDAIVVVENVERIM 420

Query: 421  SEEGLSPLEATRKAMKQISGAIIGVTVVLISVFVPLAFFAGSTGNIYRQFSAVMVTSIAF 480
            SEEGLSP  AT KAM+QI+GA+IG+T+VL++VFVP+AFF GS G +Y+QFSA MV SI F
Sbjct: 421  SEEGLSPRAATEKAMEQITGAVIGITLVLMAVFVPMAFFPGSVGIMYQQFSAAMVVSIGF 480

Query: 481  SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGFTRTAKGYESVVARILKRAARY 540
            SAF+ALSLTPALCATLLKPVE GH H  RGFFGWFNR   R  + Y +    ++ R  R+
Sbjct: 481  SAFLALSLTPALCATLLKPVEKGHGHATRGFFGWFNRRLDRATRSYGNATRWMVARGGRF 540

Query: 541  LVIYAVIIGAVVFTYMRLPSSFLPAEDQGNIIVNVQLPPGATQERALSVMQQVEGFILKQ 600
            +++Y V++  + F + RLP  F+P +DQG ++V+V  P  A+  R   V++ VE  +   
Sbjct: 541  MLLYVVLLAVLSFAFWRLPGGFVPIDDQGFVMVDVLAPSDASANRTADVVRSVEKTLAAT 600

Query: 601  PEVQSMVGVMGFSFSGQGQNAGLAFVTLKDWEERKDPAHSASALAGRAFGALSGIRDAFI 660
            P +  +  + GFSF GQG N   AFV+LKDW ER     SA AL  R     + IRDA +
Sbjct: 601  PGIDKVTFITGFSFFGQGANTAQAFVSLKDWSERSS-NESADALIARLNPEFAKIRDADV 659

Query: 661  YPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMAGQSKILAQVRPDGLEDA 720
              L+PPPI  LG  SGFSFRLQDRS  G++AL+ A+++LL  A +S +L+ V  +GL  A
Sbjct: 660  SVLAPPPIDNLGTTSGFSFRLQDRSQRGYDALMVAKDELLAAAARSPVLSSVTVEGLPPA 719

Query: 721  PQLQIDIDRDKANALGVSFDAINATLSTGLGSSYINDFPNRGRLQRVMVQADAPARMQPD 780
            PQ+++DIDR KA ALGV+F AIN  LST LGSSYINDF N GR+QRV+VQA+   R++P+
Sbjct: 720  PQVRLDIDRRKAAALGVTFAAINGALSTNLGSSYINDFLNLGRMQRVVVQANEDKRVKPE 779

Query: 781  DLLRLNASNSQGQPVPLSAFATTRWVKGATQTVRYNGYPAIRISGDAAPGFSTGAAMAEM 840
            DLL  +  N+ G+ VP S+FA   WV G TQ V ++GYP++R++G+ APG+S+G A+AEM
Sbjct: 780  DLLSYSVRNNAGEMVPFSSFARVAWVVGPTQVVGFDGYPSVRLTGNPAPGYSSGDAIAEM 839

Query: 841  EKLARQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWTIPLAVILV 900
            E+L R LP GFG+ WTGQS +EKLAGSQA+ L G +IL VFLCLAALYESW+IP AV+L 
Sbjct: 840  ERLMRTLPGGFGYAWTGQSLQEKLAGSQAVFLLGLSILFVFLCLAALYESWSIPFAVMLA 899

Query: 901  VPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGIIESAL 960
            VPLG++G + A MLR   NDVY  VG++TIIGLSAKNAILIIEFAKDL+A G  ++E+ +
Sbjct: 900  VPLGLVGSVAAAMLRGLPNDVYLTVGIVTIIGLSAKNAILIIEFAKDLRAHGTPLVEATI 959

Query: 961  AAAHLRFRPIVMTSLAFGLGVVPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVPVF 1020
             AA LRFRPI+MTSLAF LGVVPLV+ASGA +ASQ+A+GTGVLGGM+T T LAV +VPVF
Sbjct: 960  TAAELRFRPIIMTSLAFILGVVPLVIASGASAASQQALGTGVLGGMITATVLAVFWVPVF 1019

Query: 1021 FVVVRTLFKGSARQHEAD 1038
            FVVV   F G     EAD
Sbjct: 1020 FVVVMRFFAGRRTAPEAD 1037