Pairwise Alignments

Query, 1053 a.a., efflux RND transporter permease subunit from Variovorax sp. OAS795

Subject, 1070 a.a., multidrug resistance protein (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score = 1118 bits (2893), Expect = 0.0
 Identities = 557/1026 (54%), Positives = 747/1026 (72%), Gaps = 2/1026 (0%)

Query: 1    MAKFFIDRPIFAWVIALFVLVMGGVAITQLPISQYPPVAPPAIVINVAYPGASAQTLEDS 60
            MA+FFIDRP+FAWVIA+ +++ G ++I  LP+SQYP +AP ++ I+ +YPGASA+T+ED+
Sbjct: 1    MARFFIDRPVFAWVIAIIIMLAGALSILSLPVSQYPKIAPTSVNISASYPGASAKTVEDT 60

Query: 61   VLSVIEREMNGSPGLIYMESVAQADGSGTITISFEAGTNDDLAQVDVQNRLSRATPRLPA 120
            V  VIE++M G   L YM S + A G  +IT++F+A T+ D+AQV VQN+L+ ATP LP 
Sbjct: 61   VTQVIEQKMKGIDSLRYMSSTSDATGQVSITLTFDASTDPDIAQVQVQNKLALATPMLPE 120

Query: 121  AVTQQGVRVDKARNNFLMFVMLSSDNPAFDPVALGDYTARNIVPELQRVIGVGQAQLFGS 180
            AV +QG+ V+K+ ++FLM + L+SD+P+     L DY A  ++  + RV GVG+ QLFG+
Sbjct: 121  AVQRQGITVNKSTSSFLMIIALASDDPSLTGRDLSDYAATYLLDPISRVDGVGETQLFGA 180

Query: 181  ENAMRIWIDPAKLQGYALSATDVNNAIRAQNAQVSSGTLGDLPNIPGQAIAATVVVNGQL 240
            + AMR+W+DP KL  Y ++  DV +AI AQN Q+S G +G  P +PGQ ++ T++    L
Sbjct: 181  QYAMRVWLDPHKLMNYRMTPADVRSAITAQNTQISVGQIGGTPAVPGQGMSFTILSQSLL 240

Query: 241  ANVEQFKNIVLRANTNGSTVRLKDVARVELGGQSYATSARLNGVPAVGIGVQPTPNGNAL 300
               EQF+ IVLR   +GSTVRL DVARVELG ++Y   +  NG P+ GI ++     NAL
Sbjct: 241  QTREQFERIVLRVEQDGSTVRLADVARVELGSENYDAVSHFNGKPSTGIAIKLATGANAL 300

Query: 301  QSAKAIRAKMAELERFFPPGVKWDIPYDSSRFVQISITEVVKTLLEAVALVFVVMFLFLQ 360
             + K +R  M  L +  P G++   PYD++ FV++SI EVVKTL EA+ LVF+VM+LFLQ
Sbjct: 301  DTVKRVRTTMEGLAKNLPEGIRCVFPYDTTPFVRVSIEEVVKTLAEAIVLVFLVMYLFLQ 360

Query: 361  NWRYTIIPTIVVPIALLGTFASLLALGFSINVLTMFGMVLVIGIVVDDAIVVVENVERIM 420
            N R TIIPTI VP+ LLGTF +L A GFSIN+LTMFG+VL IG++VDDAIVVVENVERIM
Sbjct: 361  NIRATIIPTIAVPVVLLGTFGALAAFGFSINMLTMFGVVLAIGLLVDDAIVVVENVERIM 420

Query: 421  SEEGLSPLEATRKAMKQISGAIIGVTVVLISVFVPLAFFAGSTGNIYRQFSAVMVTSIAF 480
            +EEGL P EATRK+M +I+GA++G+ +VL +VF+P+AF  GS+G IYRQFS  +V+++  
Sbjct: 421  TEEGLPPREATRKSMGEITGALVGIALVLSAVFIPMAFIKGSSGVIYRQFSLTIVSAMTL 480

Query: 481  SAFMALSLTPALCATLLKPVEAGHHHEKRGFFGWFNRGFTRTAKGYESVVARILKRAARY 540
            S  +AL LTPALCAT LKP+    H  + GFFGWFNR F RT++GY   V  +  R  R 
Sbjct: 481  SVVVALVLTPALCATFLKPLHKHEHQAQGGFFGWFNRMFDRTSRGYRKQVTGVTGRVGRT 540

Query: 541  LVIYAVIIGAVVFTYMRLPSSFLPAEDQGNIIVNVQLPPGATQERALSVMQQVEGFIL-- 598
            + IYA+++    F +MRLP+SFLP EDQG I   VQLP G+ QE+ L V++++E   L  
Sbjct: 541  MCIYALLLAGTAFLFMRLPTSFLPEEDQGVIFSLVQLPTGSPQEKTLEVLKKLEHHYLVD 600

Query: 599  KQPEVQSMVGVMGFSFSGQGQNAGLAFVTLKDWEERKDPAHSASALAGRAFGALSGIRDA 658
            ++  V S+  V GFSF+G+GQNAGLAFV LK W+ERK    SA+A+AGRA  A S IR++
Sbjct: 601  EKETVNSLFTVAGFSFAGRGQNAGLAFVQLKPWDERKGEGMSAAAVAGRAMRAFSRIRNS 660

Query: 659  FIYPLSPPPIPELGNASGFSFRLQDRSGAGHEALINARNQLLGMAGQSKILAQVRPDGLE 718
             +Y  +PP + ELGNASGF+  LQDR G GHEAL+ ARNQLLGMA Q+  +A +RP+G+E
Sbjct: 661  VVYAFTPPAVQELGNASGFNLFLQDREGVGHEALMQARNQLLGMAAQNPAIAVLRPNGME 720

Query: 719  DAPQLQIDIDRDKANALGVSFDAINATLSTGLGSSYINDFPNRGRLQRVMVQADAPARMQ 778
            D PQ +ID+D  KA A G++   +N  LST LG +Y+NDF +RGR+++V +Q DAP RM 
Sbjct: 721  DTPQFRIDVDAAKAGAHGLTMADVNGVLSTALGGAYVNDFIDRGRVKKVYLQGDAPFRMM 780

Query: 779  PDDLLRLNASNSQGQPVPLSAFATTRWVKGATQTVRYNGYPAIRISGDAAPGFSTGAAMA 838
            P+D+   +  N+QG  VP SAF+T  W  G+ +  RYNG PA+ + G AAPG STG AM 
Sbjct: 781  PEDINAWHVRNAQGNMVPFSAFSTASWTYGSPRLERYNGLPAVELVGSAAPGKSTGEAMQ 840

Query: 839  EMEKLARQLPQGFGFEWTGQSREEKLAGSQAIVLYGFAILAVFLCLAALYESWTIPLAVI 898
             +E +A +LP G G  WTG S +E+++GSQA  LY  +IL VFLCLAALYESW++P AVI
Sbjct: 841  AVEDMAAKLPPGVGISWTGLSYQERMSGSQAPALYAISILVVFLCLAALYESWSVPTAVI 900

Query: 899  LVVPLGVLGVLLATMLRAYSNDVYFQVGLITIIGLSAKNAILIIEFAKDLQAQGKGIIES 958
            LVVPLG++G L+AT+ R  +NDV+FQVGL+T IGL+AKNAILI+EFA  L   G+ ++++
Sbjct: 901  LVVPLGIIGALMATLGRGLNNDVFFQVGLLTTIGLAAKNAILIVEFAMHLVKSGRPLLDA 960

Query: 959  ALAAAHLRFRPIVMTSLAFGLGVVPLVLASGAGSASQRAIGTGVLGGMVTGTALAVIFVP 1018
               AA LR RPI+MTSLAF LGV+P+ +++GAGS SQRAIGTGV+GGM + T LAV FVP
Sbjct: 961  TAEAARLRLRPILMTSLAFLLGVLPMAISTGAGSGSQRAIGTGVMGGMFSATVLAVYFVP 1020

Query: 1019 VFFVVV 1024
            VFFV+V
Sbjct: 1021 VFFVMV 1026