Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 345 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

 Score =  310 bits (793), Expect = 5e-89
 Identities = 149/341 (43%), Positives = 221/341 (64%), Gaps = 3/341 (0%)

Query: 2   KTFIKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESM 61
           K F   L  +A+  ++ +  +Q L  Y W  Y+P + L+ F ++ G+ + YST+E+NESM
Sbjct: 4   KLFASALCAAALFTTNAMAKDQELYFYNWSEYIPSEVLEDFTKETGIKVIYSTYESNESM 63

Query: 62  YTKLKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKF 121
           Y KLK  +G GYD+V  S YF+ KM +EG+L EIDH+++ + KD  P  L    DP NKF
Sbjct: 64  YAKLKT-QGAGYDLVVPSTYFVSKMRKEGMLQEIDHSKLSHFKDLDPNYLNKPFDPGNKF 122

Query: 122 SLPYIWGITGLYYNSSTLPN-GITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSIN 180
           S+PYIWG TG+  N+  L    +  W DLWD ++  Q+ML+DD R+VF +AL   G+S N
Sbjct: 123 SIPYIWGATGIGINTDMLDKKSLKNWGDLWDAKWAGQLMLMDDAREVFHIALSKLGYSPN 182

Query: 181 TKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKF 240
           T N +EIK AY  L  L  NVL++NSD P  PY++GE +LGM WNG+AY  + E   ++ 
Sbjct: 183 TTNPKEIKAAYRELKKLMPNVLVFNSDFPANPYLAGEVSLGMLWNGSAYMARQEGAPIQI 242

Query: 241 VMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLP 300
           + PE+G + WMD+ +IP+G+KNI  AHK I+F+ +PEN A+I   +GY +  K    LLP
Sbjct: 243 IWPEKGTIFWMDSISIPAGAKNIEAAHKMIDFLLRPENAAKIALEIGYPTPVKTAHDLLP 302

Query: 301 AELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLR 341
            E  ++P+I+P    +  GE+ ++VG E   +Y++Y+Q+L+
Sbjct: 303 KEFANDPSIYPPQSVIDNGEWQDEVG-EASVLYDEYFQKLK 342