Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 347 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotD from Pectobacterium carotovorum WPP14

 Score =  287 bits (735), Expect = 2e-82
 Identities = 136/329 (41%), Positives = 210/329 (63%), Gaps = 2/329 (0%)

Query: 14  VASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKLKLLKGTGY 73
           ++++     +TL  Y W  Y+P   L+ F ++ G+ + YST+E+NESMY KLK  K   Y
Sbjct: 17  ISTANADDSKTLYFYNWTEYVPPGLLEQFTKETGIKVIYSTYESNESMYAKLKTYKDGAY 76

Query: 74  DVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLAHDPQNKFSLPYIWGITGLY 133
           D+V  S YFI KM +EG+L +ID +++ N  +  P +L  + DP N +S+PYIWG T + 
Sbjct: 77  DLVVPSTYFISKMSKEGMLQKIDTSKLSNFHNLDPNLLHKSFDPNNDYSIPYIWGATAIG 136

Query: 134 YNSSTL-PNGITKWADLWDKQYEQQVMLIDDIRDVFGMALKLNGFSINTKNEEEIKKAYE 192
            N   + P  +T+WADLWD +Y+  ++L DD R+VF +AL+  G+S NT + +EI+ AY+
Sbjct: 137 INHEMIDPASVTRWADLWDTKYKNSLLLTDDAREVFQIALRKLGYSANTTDPKEIEAAYK 196

Query: 193 SLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQGQVEMPELKFVMPEEGAVLWMD 252
            L AL  NVL +NSD P  P++ GE  LGM WNG+AY  +     L  + P+EG + WMD
Sbjct: 197 ELQALMPNVLTFNSDNPGNPFIEGEVNLGMVWNGSAYVARQAGTPLDVIWPKEGGIFWMD 256

Query: 253 NFTIPSGSKNIPLAHKFINFMYQPENQAEIVQSLGYASATKGGRALLPAELRDNPTIFPS 312
           +  IP+ +KN+  A K I+F+ +PE  A++ +++GY +     + LLP E+  + T++P 
Sbjct: 257 SLAIPANAKNVDGAMKLIDFLLRPEVAAQVAETIGYPTPNLAAKKLLPPEVSGDKTLYPD 316

Query: 313 DEDMKKGEFINDVGPETLAIYEKYWQRLR 341
           DE + KGE+ NDVG  +  +YE Y+Q+L+
Sbjct: 317 DETIAKGEWQNDVGSAS-TLYETYFQQLK 344