Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., polyamine ABC transporter substrate-binding protein from Magnetospirillum magneticum AMB-1

 Score =  142 bits (357), Expect = 2e-38
 Identities = 97/329 (29%), Positives = 171/329 (51%), Gaps = 23/329 (6%)

Query: 8   LVLSAV--VASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTKL 65
           L+ +AV  V+ +Q   ++ LNVY W  Y+   +L+ F    G+ +NY  +++NE +  KL
Sbjct: 12  LIAAAVSSVSGAQAAEDKVLNVYNWSDYIAPDTLEKFTALTGIKVNYDVYDSNEVLQAKL 71

Query: 66  KLLKGTGYDVVFASAY-FIEKMGREGLLAEIDHNQIPNMK--DAMPTV-LGLAHDPQNKF 121
           +  K +GYDVVF SA  F+    + G+  ++D +++ N    DA   V L  A DP N +
Sbjct: 72  QAGK-SGYDVVFPSASPFLANQIKAGIYRKLDRSKLSNYGNLDAQVMVTLNRAADPGNLY 130

Query: 122 SLPYIWGITGLYYNSSTLPNG-----ITKWADLWDKQYEQQ-----VMLIDDIRDVFGMA 171
           ++PY    TG  YN   +        +  WA L+D     +     V L+D   +VF  A
Sbjct: 131 AIPYAISPTGFAYNVDKVAKAGKDMPLDSWAALFDPAQVAKLKGCGVSLLDAPTEVFPAA 190

Query: 172 LKLNGFSINTKNEEEIKKAYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQG 231
           L   G +  + +  ++K A E++  ++ ++  ++S        +G+  +   + G+  Q 
Sbjct: 191 LTYLGKNGASLDSADLKAAAEAVTKVRPSIKYFHSSKFINDLANGDICMAHGYVGDLVQS 250

Query: 232 QVEMPE------LKFVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQS 285
           +    E      +K V+P+EGAV+ +D+  IP+ + +   AHKFI+FM + E  A    +
Sbjct: 251 RNRAAEAGKGVNIKIVIPKEGAVINIDSMVIPADAPHPENAHKFIDFMMKQEVAAGFSNT 310

Query: 286 LGYASATKGGRALLPAELRDNPTIFPSDE 314
            GY +   G R+L+  E++++P IFPS++
Sbjct: 311 TGYGNPIPGSRSLIRKEIQEDPVIFPSEQ 339