Pairwise Alignments

Query, 343 a.a., spermidine/putrescine ABC transporter substrate-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 369 a.a., spermidine/putrescine ABC transporter substrate-binding protein PotF from Dickeya dianthicola ME23

 Score =  160 bits (406), Expect = 4e-44
 Identities = 97/358 (27%), Positives = 188/358 (52%), Gaps = 23/358 (6%)

Query: 5   IKGLVLSAVVASSQVYAEQTLNVYAWGGYLPEKSLKAFEQQEGVTINYSTFENNESMYTK 64
           + GL+++A V +S    E+TL+VY W  Y+   +L+ F+++ G+ + Y  F++NE +  K
Sbjct: 13  LTGLMMAASVTASA--EEKTLHVYNWSDYIAPDTLENFQKESGINVVYDVFDSNEVLEGK 70

Query: 65  LKLLKGTGYDVVFASAYFIEKMGREGLLAEIDHNQIPNMKDAMPTVLGLA--HDPQNKFS 122
           L +   TG+D+V  SA F+ +    G+   +D +++PN K+  P ++ L   HDP +K++
Sbjct: 71  L-MAGSTGFDLVVPSASFLGRQISAGVFQPLDKSKLPNYKNLDPELMKLIEEHDPGHKYA 129

Query: 123 LPYIWGITGLYYNSSTLPNGITKWADL--WDKQYEQQ---------VMLIDDIRDVFGMA 171
           +PY+W  TG+ YN   +   + K A +  WD   + +         V  +D   +++   
Sbjct: 130 VPYLWATTGIGYNVDKVKAILGKDAPVNSWDLVLKPENLEKLKSCGVAFLDAPAEIYATV 189

Query: 172 LKLNGFSINTKNEEEIKK-AYESLVALKKNVLLYNSDAPHVPYVSGEATLGMQWNGNAYQ 230
           L   G + N+ NE +  K A + L+ L+ +V  ++S        +G+  + + W G+  Q
Sbjct: 190 LNYQGKNPNSANESDYTKDATDLLLKLRPSVRYFHSSQYINDLANGDICVAIGWAGDVMQ 249

Query: 231 GQVEMPELK------FVMPEEGAVLWMDNFTIPSGSKNIPLAHKFINFMYQPENQAEIVQ 284
                 + K      + +P+EGA+ + D F IP  +KN+  A++F+N++ +P+  A +  
Sbjct: 250 AANRAKDAKNGVNISYSIPKEGALAFFDVFAIPKDAKNLDSAYQFLNYLLKPDVIANVSN 309

Query: 285 SLGYASATKGGRALLPAELRDNPTIFPSDEDMKKGEFINDVGPETLAIYEKYWQRLRN 342
            + YA+  K   AL+  E+R+NP I+P  +   K   +    P+   +  + W ++++
Sbjct: 310 HVYYANPNKEATALVKEEVRNNPNIYPPADIRAKLFTLKVQSPKIDRVITRSWTKVKS 367