Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 492 a.a., long-chain acyl-CoA synthetase from Pseudomonas simiae WCS417

 Score =  285 bits (730), Expect = 2e-81
 Identities = 183/477 (38%), Positives = 264/477 (55%), Gaps = 18/477 (3%)

Query: 3   RILAALQQHALHQPQKMAFVGHNAQQERIALNYSQLLERVDLIANQLQRLSANCIALRAQ 62
           R  A L+ HA      +A  G   +     ++Y+ L   V     +L+      +AL   
Sbjct: 7   RFHAVLRGHAERNDGAIALWGDTWK-----MDYTSLFAEVAYRQERLRDEGVKVVALALD 61

Query: 63  NSVDWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVELCLGDWPELGSPSLTVGGF 122
           N VD +  DLA ++  +  + +P FF+  Q AH L +++ E  + + P L +  L  GG+
Sbjct: 62  NGVDAMLWDLAVLFEGLTCLTLPPFFSPAQRAHCLEQSHAERVIAE-PHLAA-ELQAGGY 119

Query: 123 -DAWHYQGNKPRNRPNRVLAGTQKITFTSGSTGTPKGVCLSEENLERVTLAIAEQM-SAQ 180
             A  +       RP  + + T K+TFTSG+TG PKGVCLS ++L RVT  + +   S  
Sbjct: 120 RQAGEFWCRTFEGRP-AMPSNTAKLTFTSGTTGAPKGVCLSADSLLRVTRELHQASHSRD 178

Query: 181 VEQHLVMLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSVYQP 240
              HL +LP+A LLEN+ G Y  L  G T S+   +S+G+ G+S     Q    L+  QP
Sbjct: 179 PRHHLALLPIAILLENL-GCYAALYAGATLSLPSQKSLGIQGASAVDAAQLLGCLATRQP 237

Query: 241 SSLVLTPALLMALIQVVKQAPELAKSLQWVAVGGARVAAELIHSARALGIPAYEGYGLSE 300
            SL+L P LL+ L+   +Q     KSL++ AVGGARV+  L+  A+ LG+  YEGYGLSE
Sbjct: 238 HSLILVPQLLLMLVIAAEQKAFNPKSLRFAAVGGARVSKALLQRAQQLGMTVYEGYGLSE 297

Query: 301 CASVVSMNTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSALGYIGEP-LTDEWLATGD 359
           CASVV +N P+  +PGS G+PL H++I+LAEDGE+ V+G   LGY+ +P L   W  TGD
Sbjct: 298 CASVVCLNHPEAHRPGSVGRPLPHVEIRLAEDGEVLVKGPMLLGYLDQPDLHAPWWPTGD 357

Query: 360 LATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVGDDEVGLVAVI 419
           L  +DE GFL + GRKK+  +T +GRN+ P+W+E+         +  V G+      A++
Sbjct: 358 LGDVDEDGFLYLKGRKKHQFVTSYGRNVNPDWVEAELTQGGIIAQAFVYGEALPENHALL 417

Query: 420 DRLMPD-----LEQRVQQINHQLPDYAQIQQLLFVNQP-SAWQAWLTANGRPKRALI 470
             L  D     L   V + N  LPDYAQ+ +   + +P +     LTANGRPKR  I
Sbjct: 418 WPLRADCSAAQLAAAVAEANTGLPDYAQVHRWTRLAEPFTTANGLLTANGRPKRDAI 474