Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., putative Long-chain-fatty-acid--CoA ligase from Pseudomonas putida KT2440

 Score =  296 bits (758), Expect = 1e-84
 Identities = 191/483 (39%), Positives = 272/483 (56%), Gaps = 22/483 (4%)

Query: 6   AALQQHALHQPQKMAFVGHNAQQERIALNYSQLLERVDLIANQLQRLSANCIALRAQNSV 65
           A L+QHA+  P  +A  G +AQ+      Y QLL  V+  A+ L+       A+   N  
Sbjct: 10  ALLRQHAVEHPDAVAVQG-DAQR----YTYRQLLNEVESRASCLRSQPPGTFAVVLDNGP 64

Query: 66  DWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVE--LCLGDWPELGSPSLTVGGFD 123
           + +  DLAA+++    V VP FF++ Q  H L ++ V   +C   W E     L   GF 
Sbjct: 65  EALFWDLAALFAERASVTVPPFFSATQFQHCLQQSGVTAVVCEAQWAE----QLIALGFA 120

Query: 124 AWHYQGNKPRNR--PNRVLAGTQKITFTSGSTGTPKGVCLSEENLERVTLAI-AEQMSAQ 180
                G   R+      +  GT KIT+TSGSTGTPKGVCLS E L RV   + A      
Sbjct: 121 RQAPAGVWQRDSFVAPALPEGTAKITYTSGSTGTPKGVCLSAETLLRVAHELEAASRPTA 180

Query: 181 VEQHLVMLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSVYQP 240
            +++L +LPL  LLEN+ G+Y  L+ G    +   + +G+ G+SQ    +    +++   
Sbjct: 181 PQRYLAVLPLGVLLENL-GVYAALMAGACVQLYPQQQLGMGGASQVDFKRLLGAIALSGA 239

Query: 241 SSLVLTPALLMALIQVVKQAPELAKSLQWVAVGGARVAAELIHSARALGIPAYEGYGLSE 300
            SL+L P LLM L+  +++       L+ VAVGGARV+  L+  A A+G+P +EGYGLSE
Sbjct: 240 QSLILVPQLLMGLVTAIERGLMRVGPLRLVAVGGARVSPSLLARAEAVGLPVFEGYGLSE 299

Query: 301 CASVVSMNTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSALGYIGE-PLTDEWLATGD 359
           CASVV++N     +PGS GKPL H+Q+++AEDGE+ V G++ LGY+GE P+T +W ATGD
Sbjct: 300 CASVVALNRTGAVRPGSVGKPLPHVQVRIAEDGEVLVAGSTLLGYLGEPPVTGQWWATGD 359

Query: 360 LATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVGDDEVGLVAVI 419
           +  LDE G+L + GRKK+  IT FGRN+ PEW+E+         +  V G+     +A++
Sbjct: 360 VGHLDEDGYLYLDGRKKHQFITSFGRNVNPEWVEAELSQSGVIAQAFVHGEALPRNLALL 419

Query: 420 DRLMPD-----LEQRVQQINHQLPDYAQIQQLLFVNQP-SAWQAWLTANGRPKRALIENA 473
             L P      +EQ VQQ N +LPDYA++     +  P S     LTANGRP+R  I   
Sbjct: 420 WPLDPGISDEAIEQAVQQCNARLPDYARVHAWRRLPVPLSTLDETLTANGRPRREAILQR 479

Query: 474 QHT 476
            HT
Sbjct: 480 YHT 482