Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 487 a.a., Long-chain-fatty-acid--CoA ligase from Pseudomonas sp. S08-1

 Score =  289 bits (740), Expect = 1e-82
 Identities = 182/493 (36%), Positives = 280/493 (56%), Gaps = 24/493 (4%)

Query: 4   ILAALQQHALHQPQKMAFVGHNAQQERIALNYSQLLERVDLIANQLQRLSANCIALRAQN 63
           + AALQ HA+  P  +A      Q     ++Y+QL   V++   +L+ L    +AL   N
Sbjct: 6   LFAALQHHAVQCPTALALSDSQRQ-----VDYAQLWREVEIRGARLRALQVPLLALALNN 60

Query: 64  SVDWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVELCLGDWP---ELGSPSLTVG 120
             + +  DLAA+ + +  + +P FF+  Q AH L ++   L L + P   EL      V 
Sbjct: 61  GCEALIWDLAALRAGVACLILPPFFSPAQRAHCLEQSGATLALAEGPFAEELAPLGFAVA 120

Query: 121 GFDAWHYQGNKPRNRPNRVLAGTQKITFTSGSTGTPKGVCLSEENLERVTLAIAEQMSAQ 180
           G + W  + + P   P  + AGT KIT+TSG+TG PKGVCLS E + RV   + E +S +
Sbjct: 121 G-EFWQ-RDSAPAGLP--LPAGTAKITYTSGTTGVPKGVCLSAEAMLRVAAEL-ELVSRE 175

Query: 181 V--EQHLVMLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSVY 238
              ++++ +LPLA LLEN+ G+Y  L+ G T  +   + +G+S +      +    +  +
Sbjct: 176 CAPQRYMAVLPLAVLLENL-GLYAALIAGATLHLPTQQELGMSVAGSVEWPKLFGQMVRH 234

Query: 239 QPSSLVLTPALLMALIQVVKQAPELAKSLQWVAVGGARVAAELIHSARALGIPAYEGYGL 298
              SL+L P LL  L+  V++    A   +++AVGGARV+ EL+  A+ +G+P +EGYGL
Sbjct: 235 GCQSLILVPQLLFGLVVAVERGFVPAAGFRFIAVGGARVSPELLERAQRVGLPVFEGYGL 294

Query: 299 SECASVVSMNTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSALGYIGE-PLTDEWLAT 357
           SECASVV +N P   +PG+ G+PL H+Q++LAEDGE+ V G++ LGY+G+ P   +W  T
Sbjct: 295 SECASVVCLNRPGAQRPGTVGRPLPHVQVRLAEDGEVLVAGSTLLGYLGDTPFAGQWWPT 354

Query: 358 GDLATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVGDDEVGLVA 417
           GD+   D  G+L + GRKK+  +T FGRN+ PEW+E+         +  V G+     VA
Sbjct: 355 GDIGEFDADGYLSLRGRKKHQFVTSFGRNVNPEWVEAELTQGGVLMQAFVYGESLPSNVA 414

Query: 418 VIDRLMPD-----LEQRVQQINHQLPDYAQIQQLLFVNQP-SAWQAWLTANGRPKR-ALI 470
           ++  L P+     +E  VQ+ N  LPDYA++ + + ++ P S     LTANGRPKR A++
Sbjct: 415 LLWPLDPNCADAAIEAAVQKANGGLPDYARVGRWVRLDTPFSPANGLLTANGRPKRDAIL 474

Query: 471 ENAQHTFRRVRNA 483
              +  F    NA
Sbjct: 475 ARYREHFSEPVNA 487