Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 498 a.a., Long-chain-fatty-acid--CoA ligase from Methylophilus sp. DMC18

 Score =  294 bits (752), Expect = 6e-84
 Identities = 191/489 (39%), Positives = 267/489 (54%), Gaps = 25/489 (5%)

Query: 4   ILAALQQHALHQPQKMAFVGHNAQQERIALNYSQLLERVDLIANQLQRLSANC-IALRAQ 62
           IL  +Q  A   P ++A  G   Q     L+Y+ L + +  +++ L  L+    +AL   
Sbjct: 2   ILNEIQAQAAQVPGQIALQGAQTQ-----LSYAALAKEITRVSSALMTLTPQASVALALD 56

Query: 63  NSVDWVALDLAAMWSHIVMVPVPTFFTSEQVAHLLNEANVELCLGD----WPELGSPSLT 118
           NS  W+ LDLA + +    VPVP FF++ Q  H + +A V L L D    W  L   +  
Sbjct: 57  NSPAWIVLDLAILAAGWTNVPVPAFFSATQKQHAILDAGVSLVLTDTPAVWLGLFPEAAL 116

Query: 119 VGGFDAWHYQGNKPRNRPNRVLAGTQKITFTSGSTGTPKGVCLSEENLERVTLAIAEQMS 178
           V  +          R + +   A   KIT+TSG+TG PKGVCLSE+++ +V  +I  Q+ 
Sbjct: 117 VAEWQVADKMVTLLRVQAHDRAAPVAKITYTSGTTGAPKGVCLSEDHMWQVASSIRTQVK 176

Query: 179 AQVEQ-HLVMLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSGSSQFSPTQFANVLSV 237
              +  H  +LPLATLLEN+ G+Y  L+ G    V   E+VG SGS QF   +    L  
Sbjct: 177 PGHDDCHFCVLPLATLLENVAGVYASLISGTAVVVYSCEAVGFSGS-QFDIFKLYRGLQA 235

Query: 238 YQPSSLVLTPALLMALIQVVKQAPELAKSLQWVAVGGARVAAELIHSARALGIPAYEGYG 297
            Q ++ +L P LL AL+  ++        L++VAVGGA+VA  L+  A ALG+P YEGYG
Sbjct: 236 SQATTAILIPELLRALVACLQAGQSALAQLRFVAVGGAKVAPALLLQAHALGLPVYEGYG 295

Query: 298 LSECASVVSMNTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSALGY------IGEPL- 350
           LSECASVV++NTP  +Q GS G+PL H+Q+++   GELWV+G    GY      I EP  
Sbjct: 296 LSECASVVTLNTPLANQHGSIGQPLPHVQLRVDSHGELWVKGAIYAGYMAADGTITEPAL 355

Query: 351 -TDEWLATGDLATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVG 409
             D +L TGDLA  D +G   + GRKKNL IT FGRN++PEW+E+         +  V G
Sbjct: 356 DVDGYLPTGDLAYQDAEGHWILSGRKKNLFITSFGRNVSPEWVETTLIQQAGLLQACVFG 415

Query: 410 DDEVGLVAVI----DRLMPDLEQRVQQINHQLPDYAQIQQLLFVNQPSAWQ-AWLTANGR 464
           +     VAV+          + Q + + N  LPDYAQ+  +++  QP   Q   LTANGR
Sbjct: 416 EARPYNVAVVVLAPQASQAQVAQGIARANQGLPDYAQVGDVIYAKQPFTPQNGQLTANGR 475

Query: 465 PKRALIENA 473
            KR +I  A
Sbjct: 476 LKRDVIAAA 484