Pairwise Alignments

Query, 507 a.a., long-chain fatty acid--CoA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 598 a.a., AMP-dependent synthetase from Magnetospirillum magneticum AMB-1

 Score =  117 bits (294), Expect = 9e-31
 Identities = 123/529 (23%), Positives = 209/529 (39%), Gaps = 97/529 (18%)

Query: 21  FVGHNAQQERIALNYSQLLERVDLIANQLQRLS---ANCIALRAQNSVDWVALDLAAMWS 77
           F+GH A     AL++     RV  +A  L+ L     + + L A+N  +W   DLA M +
Sbjct: 27  FLGHKADGHWHALSWRDAAARVLALAAGLRALGLGQGDRVMLVAENRPEWALADLAIMAA 86

Query: 78  HIVMVPVPTFFTSEQVAHLLNEANVELCLGDWPELG------------------------ 113
             + VP  T  T     H+L+     L +     L                         
Sbjct: 87  GGISVPAYTTNTVADHLHILDNCGARLVIVSTRALAERVLPAATRSAQAPAIISMEPLAL 146

Query: 114 --SPSLTVGGFDAWHYQGNKPRNRPNRVLAGTQK-----ITFTSGSTGTPKGVCLSEENL 166
             SP + V  +D+    G         ++A  ++     + +TSG+ G PKGV LS   +
Sbjct: 147 AQSPGVDVHSWDSVLGLGQGGEAAIQAIVAAQKRTDTACLIYTSGTGGVPKGVMLSHGAI 206

Query: 167 ERVTLA---IAEQMSAQVEQHLVMLPLATLLENITGIYVPLLLGVTSSVLFGESVGLSGS 223
               +    +  ++  + E  L  LPL+   E+  G+Y P+ +G       G     +  
Sbjct: 207 LCNCMGATDVLRELGLEDEVFLSFLPLSHAYEHTAGLYFPISIGAEIRYAEGLEHLAANM 266

Query: 224 SQFSPTQFANVLSVYQPSSLVLTPALL-------------------------MALIQVV- 257
           ++ SPT    V  +Y+     +   L                          ++L Q + 
Sbjct: 267 AEVSPTIMTAVPRLYETMRTRILKGLTRVSPLRRRLFLAALDLGTRRLKGERLSLAQRLA 326

Query: 258 ----------KQAPELAKSLQWVAVGGARVAAELIHSARALGIPAYEGYGLSECASVVSM 307
                     K        L+    GGA +  ++     ALG+   +GYG +E A V+++
Sbjct: 327 DRVLERLVRGKVRARFGGRLKAFVSGGAPLPYDVGAFFMALGVRILQGYGQTEAAPVIAV 386

Query: 308 NTPQHDQPGSCGKPLSHLQIQLAEDGELWVRGNSAL-GYIGEPLT-------DEWLATGD 359
           N P  ++  + G  +  +++++A DGE+ VRG   + GY  +          D WL TGD
Sbjct: 387 NRPDRNRIETVGPTMLGVEVKIAGDGEILVRGELVMQGYWRDSAATAQAIDADGWLHTGD 446

Query: 360 LATLDEQGFLCIVGRKKNLIITPFGRNIAPEWIESHAQVWLPQCRFVVVGDDEVGLVAVI 419
           +  +D  G + I  RKK++I+   G N+AP+ IES   +     + +V GD    LVA+I
Sbjct: 447 IGEVDPDGIMRITDRKKDIIVNSGGDNVAPQRIESFLTLEPEIAQAMVHGDRRPHLVALI 506

Query: 420 ----------------DRLMPDLEQRVQQINHQLPDYAQIQQLLFVNQP 452
                           + L   +   V ++N QL    +I++ + V  P
Sbjct: 507 VPDRDWVQSQAHLENKEELRKAISLAVDRVNRQLSPIEKIRRFMIVRDP 555