Pairwise Alignments

Query, 218 a.a., DNA-binding response regulator from Vibrio cholerae E7946 ATCC 55056

Subject, 219 a.a., two-component system response regulator PmrA from Erwinia amylovora T8

 Score =  203 bits (517), Expect = 2e-57
 Identities = 99/218 (45%), Positives = 150/218 (68%)

Query: 1   MRLLLVEDDTLLGESMQVALSRQGYTVDWLERGGGVVTALKTEQFTALILDLTLPDMDGL 60
           M++L+VEDDTLL + + +AL+ +GY VD           L++ Q++ ++LDL LPD DG 
Sbjct: 1   MKILIVEDDTLLQQGLNLALTGEGYAVDCAANAAQGTAFLQSGQYSLVVLDLGLPDRDGA 60

Query: 61  EVLRQIRRAGYTLPVMILTARDDISDRVKGLDGGADEYIGKPFALEELLARLRLIIRRSS 120
           ++LRQ R+    LPV+IL+ARD +SDRV GLD GAD+Y+ KPFAL EL AR+R +IRR  
Sbjct: 61  DLLRQWRKEQQDLPVLILSARDALSDRVDGLDAGADDYLMKPFALAELKARVRALIRRYQ 120

Query: 121 GSAEELISVGELDLSLSKQEIYYAQQALKLTRNEYKILASLMTQAGRVMSKELLQQALHG 180
           G ++ L+  G++ L+LS Q++    Q + +T  E+ +L  L+ + G+ + +E LQQ L+ 
Sbjct: 121 GQSDNLLQHGDITLNLSSQQVAVDLQPVDVTPKEFSLLTRLLMRIGQTVHRETLQQDLYS 180

Query: 181 WDEGSSDNAIEVHIHNLRKKLPDNLVKNVRGVGYMIEK 218
           W + +S N +EVH+HNLR+KL  + +K VRGVGY +E+
Sbjct: 181 WQDDTSSNTLEVHMHNLRRKLGKDRIKTVRGVGYRLEE 218