Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 499 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score =  128 bits (322), Expect = 4e-34
 Identities = 100/351 (28%), Positives = 170/351 (48%), Gaps = 12/351 (3%)

Query: 85  YREGDLLFSSDTHLPALSLGRDANGFSDITLNGESWRYFQLSLPDQEKGKQYVLVAEKQS 144
           ++ G  ++ SD     +S  R   G   +  +G+SWR   +  P    GK  V +     
Sbjct: 115 WQNGREIYRSDGVPSGISNTRPDIG-ETVEADGKSWRARTIESPT---GKTRVTLITPGG 170

Query: 145 IRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAIALRSIHKLDRIYVE 204
           ++     +      LP +I +  L++   + I  + +P + +   IA R  H L  +   
Sbjct: 171 MQIWLTFQTRGYYVLPLIISVPFLLLPAWLSIRLALRPWRKVAREIASRGPHDLAPVTAL 230

Query: 205 KPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALRSTNQEQ 264
               ELLPLV   N L++ L  +  RE+ F   AAHEL+TP+  +RVN E AL+S   + 
Sbjct: 231 PRHEELLPLVHNFNALMDRLRASIAREQSFIADAAHELRTPIAAMRVNVE-ALQSLLTQH 289

Query: 265 LKQDLE-----RIFKGIERTDRLIHQLLMLAKVESTQTLRKQPVELANVIKQVIADLAPI 319
           +  + +     R+     R +RL+ QLL L +  + Q     P+ L +++++ +A L+ +
Sbjct: 290 IPTERQHELFARVLNSNARAERLVGQLLRLMR-SNAQASAPGPLRLDDLLQERLAALSAL 348

Query: 320 AFKQDQQLSF-HGESSRLWGDELLLGILFKNLLDNAIRYSGHSSQIAVELSDHDGEIEVR 378
           A  ++ ++     E   + GD   L  +  NL+DNA +YS   S ++V +     E  + 
Sbjct: 349 AHVREVEIELVTDEPVEIAGDRDSLVSMIDNLIDNATKYSPVGSTVSVGIRRVGNEAVLT 408

Query: 379 VSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQVLL 429
           V+D G  I    RE++FD F+R   Q   G+GLG++I R +   HGG + L
Sbjct: 409 VADQGPGIMPALRERVFDRFFRDPDQTQTGSGLGLAIVRAVIDAHGGTIAL 459