Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 480 a.a., Two-component system histidine kinase BP2548 from Variovorax sp. SCN45

 Score =  142 bits (358), Expect = 2e-38
 Identities = 98/302 (32%), Positives = 165/302 (54%), Gaps = 16/302 (5%)

Query: 141 EKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAIALRSIHKLDR 200
           EKQS+      EI     LPQ  ++   ++++ + + R  +P+  ++A I  R    L  
Sbjct: 158 EKQSV---LAAEIIKGVLLPQFAILPLAVLLIWLALVRGIKPLSVVEARIRERRPGDLSP 214

Query: 201 IYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALR-S 259
           +      +E++PLV ++N+LL++L  +   +KRF   AAH+LKTPL  LR+ A+ A R  
Sbjct: 215 LDESSVPLEVVPLVSSVNELLDKLNDSIGTQKRFLADAAHQLKTPLAGLRMQADLAQREG 274

Query: 260 TNQEQLKQDLERIFKGIERTDRLIHQLLMLAKVE-STQTLRKQPVELANVIKQVIADLAP 318
            N ++LKQ L++I +  +R    ++QLL LA+ E ++  +  QP +LA +  +V+ +  P
Sbjct: 275 ANADELKQSLKQIGRASKRATHTVNQLLSLARAEGNSANVHHQPCDLARLTIEVVREAVP 334

Query: 319 IAFKQDQQLSFHGESS-----RLWGDELLLGILFKNLLDNAIRYSGHSSQ----IAVE-L 368
            A ++   L + G  +        G++ LL  L +NL+DNA+ Y+  + +    I V  L
Sbjct: 335 RAIEKRIDLGYDGAEAGAPGVMFDGNQTLLKELVRNLVDNALNYTPSTPERPGLITVRVL 394

Query: 369 SDHDGEI-EVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQV 427
           +D  G +  ++V D G  I +  RE +F+ FYR    + DG+GLG+ I R+IA  H   V
Sbjct: 395 ADPFGHVLLLQVEDNGPGIAEADRELVFEPFYRVLGNEADGSGLGLPIVREIANQHRALV 454

Query: 428 LL 429
            L
Sbjct: 455 KL 456