Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 475 a.a., integral membrane sensor signal transduction histidine kinase from Variovorax sp. SCN45

 Score =  116 bits (291), Expect = 1e-30
 Identities = 105/412 (25%), Positives = 178/412 (43%), Gaps = 14/412 (3%)

Query: 21  DARLGQSAKLLLIATSVSANEFADRNQHEQFNLWMQHIQRLSKANDDVATLFGHPYEQYL 80
           D  L +  K+     ++S N  AD    +Q  L       L    D  A     P     
Sbjct: 47  DPELLKYDKIFQTVLAISQN-MADHPDKQQETLAAFDAALLETVGDGDAASDSSP----- 100

Query: 81  LFQFYREGDLLFSSDTHLPALSLGRDANGFSDITLNGESWRYFQLSLPDQEKGKQYVLVA 140
           + Q ++   L++ S   +P + L    N    +      WR   L     +     V++A
Sbjct: 101 VMQVWQGDRLIYRSTAAVPVI-LNSAPNRIETVKAGNREWRARTLVSATTDTR---VMLA 156

Query: 141 EKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAIALRSIHKLDR 200
           E    R            LP +I +  LI    + +  + +P + +    A R    L  
Sbjct: 157 EPSVWRLTVTVMYRGYYLLPLVISLPFLIFPAWLSVRLALRPWRQVSKETAERGPADLTP 216

Query: 201 IYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALRST 260
           +    P  EL PLV+++N LL  +  +  RE+     AAHEL+TPL  +RVN E     +
Sbjct: 217 LSYTPPHKELQPLVQSINSLLQRVRDSTSRERSLIADAAHELRTPLAAMRVNVEALKEQS 276

Query: 261 NQEQLKQDLERIFKGIERTDRLIHQLLMLAKVESTQTLRKQPVELA--NVIKQVIADLAP 318
             E  ++ +  + +  +R  RL+ QLL L + ++       PV L+   +++  +A +  
Sbjct: 277 TDEGQRELMGNLLRSNDRAARLVGQLLQLMRSDAVSD-NALPVMLSLDGLVQDRLAMIEG 335

Query: 319 IAFKQDQQLSFHGESS-RLWGDELLLGILFKNLLDNAIRYSGHSSQIAVELSDHDGEIEV 377
           +A  +  +L    E    + G+   L  +  NL++NAI+YS   S + V ++       +
Sbjct: 336 LASARGIELELVCEDRVPVLGERESLVSMIDNLVNNAIKYSPSGSTVVVHVAHEGPHALL 395

Query: 378 RVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQVLL 429
            V+D G  I    RE++FD F+R   Q   G+GLG++I + +   HGG+V L
Sbjct: 396 TVADQGPGIPAALRERVFDRFFRNPDQTQSGSGLGLAIVKSVIDRHGGEVTL 447