Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 494 a.a., Sensor protein basS/pmrB (EC 2.7.3.-) from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  156 bits (395), Expect = 1e-42
 Identities = 99/299 (33%), Positives = 157/299 (52%), Gaps = 8/299 (2%)

Query: 139 VAEKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAIALRSIHKL 198
           VAE +  R     EI     +PQ +++   ++++ + + R  +P+  L+  I  R    L
Sbjct: 169 VAETRGKRSTLAAEIIKGVMVPQFVILPLAVLLVWLALVRGIRPLNELEQRIRARKPDDL 228

Query: 199 DRIYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENALR 258
             I       E+ PLV ++N LL  L+ +   ++RF   AAH+LKTPL  LR+ AE A R
Sbjct: 229 SPIEESAIPQEVAPLVSSINDLLTRLKASLTTQRRFLADAAHQLKTPLAGLRMQAELAQR 288

Query: 259 STNQEQLKQDLERIFKGIERTDRLIHQLLMLAKVEST-QTLRKQPVELANVIKQVIADLA 317
            +N E++   L++I +   R    ++QLL LA+ E+T +TL    V+LA +++  + D  
Sbjct: 289 ESNPEEIHGSLKQIARSSSRATHTVNQLLALARAETTGRTLPSARVDLARLVRGAVQDSV 348

Query: 318 PIAFKQDQQLSFHG-----ESSRLWGDELLLGILFKNLLDNAIRYSGHSSQIA--VELSD 370
           P A +    L F G     E   + G+ +LL  + +NL+DNAI YSG    +   V +  
Sbjct: 349 PRALEHGIDLGFEGPEEVPEDCLMDGNPILLQEMVRNLVDNAINYSGRGGVVTARVLIDP 408

Query: 371 HDGEIEVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQVLL 429
             G   ++V D G  I +  RE +   FYRA     DG+GLG++I ++IA  HG  VL+
Sbjct: 409 FSGVQILQVEDNGPGIPESEREFVMQPFYRALGTNVDGSGLGLTIVQEIAQQHGATVLI 467