Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 481 a.a., Swarming motility regulation sensor protein RssA from Methylophilus sp. DMC18

 Score =  139 bits (351), Expect = 2e-37
 Identities = 88/318 (27%), Positives = 162/318 (50%), Gaps = 10/318 (3%)

Query: 137 VLVAEKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIERSFQPIQALKAAIALRSIH 196
           VL+AE    R++  + I  +  LPQL+L+L   V+L+  + +  +P+  L   IA RS  
Sbjct: 153 VLIAETVHKRNDLRSRILFAIVLPQLLLLLVCSVMLLAGVTKGLRPLHELNEEIAKRSST 212

Query: 197 KLDRIYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMAAHELKTPLTVLRVNAENA 256
           +LD + +     E + L+ ++N L+  L  A   + +F   AAH+L+TPL  ++   E A
Sbjct: 213 QLDPVMLNNVPEEAMVLINSINLLMGRLNNAILAQNQFIADAAHQLRTPLAGIQAQLELA 272

Query: 257 LRSTN-QEQLKQDLERIFKGIERTDRLIHQLLMLA--KVESTQTLRKQPVELANVIKQVI 313
           LR    ++Q +  L  I + + +   +++QLL L+  + E+   +  +PV L  + +   
Sbjct: 273 LRHEKAKDQSQHQLGMISESVSKLTHIVNQLLRLSNNQPEAANVIALKPVNLLALAQDAC 332

Query: 314 ADLAPIAFKQDQQLSFHGESS------RLWGDELLLGILFKNLLDNAIRYSGHSSQIAVE 367
            ++   A K++  L      +       +  D+  L IL  NLLDNA+RY+    ++ + 
Sbjct: 333 VEVIHFALKKNIDLGLESSGAGPLPDFTIHADKQRLKILLVNLLDNAVRYTPEGGKVTLS 392

Query: 368 LSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMSICRDIAALHGGQV 427
           +   +   E++V D G  I +     +F+ F+R  +   +G+GLG+SI ++I ALH   +
Sbjct: 393 VIAQEKWTEIQVEDNGIGIPEEEHAMVFERFHRVLNHSQEGSGLGLSIVKEIVALHSASI 452

Query: 428 LLLPRTDERNTFV-VRFR 444
            +    +   T + VRF+
Sbjct: 453 TVSAGAEGIGTLMRVRFQ 470