Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 449 a.a., sensory histidine kinase in two-component regulatory system with QseB (NCBI) from Escherichia coli BW25113

 Score =  167 bits (423), Expect = 6e-46
 Identities = 127/433 (29%), Positives = 212/433 (48%), Gaps = 32/433 (7%)

Query: 2   LVSFGFSYSNAQHEVGEVYDARLGQSAKLLLIATSVSANEFADRNQHEQFNLWMQHIQRL 61
           L+S   ++      V E++D +L   AK L   +++  NE    ++  Q    ++H    
Sbjct: 26  LLSSFVAWKQTTDNVDELFDTQLMLFAKRL---STLDLNEINAADRMAQTPNRLKH---- 78

Query: 62  SKANDDVATLFGHPYEQYLLFQ-FYREGDLLFSSDTHLPALSLGRDANGFSDITLNGES- 119
                      GH  +  L F  F  +G ++ +   +   +       GF+D  L GE  
Sbjct: 79  -----------GHVDDDALTFAIFTHDGRMVLNDGDNGEDIPYSYQREGFADGQLVGEDD 127

Query: 120 -WRYFQLSLPDQEKGKQYVLVAEKQSIRDEAINEIALSTALPQLILILCLIVVLVVLIER 178
            WR+  ++ PD   GK  ++V ++   R++    I     +P L+ +  ++++++VL+ R
Sbjct: 128 PWRFVWMTSPD---GKYRIVVGQEWEYREDMALAIVAGQLIPWLVALPIMLIIMMVLLGR 184

Query: 179 SFQPIQALKAAIALRSIHKLDRIYVEKPTVELLPLVETLNQLLNELEQAWQREKRFTRMA 238
              P+  L  A+ +R       +       E+ PLVE+LNQL         RE+RFT  A
Sbjct: 185 ELAPLNKLALALRMRDPDSEKPLNATGVPSEVRPLVESLNQLFARTHAMMVRERRFTSDA 244

Query: 239 AHELKTPLTVLRVNAENALRSTNQEQL-KQDLERIFKGIERTDRLIHQLLMLAKVESTQT 297
           AHEL++PLT L+V  E A  S +  Q  K+ L ++  GI+R  RL+ QLL L++++S   
Sbjct: 245 AHELRSPLTALKVQTEVAQLSDDDPQARKKALLQLHSGIDRATRLVDQLLTLSRLDSLDN 304

Query: 298 LRK-QPVELANVIKQVIADLAPIA--FKQDQQLSFHGESSRLWGDELLLGILFKNLLDNA 354
           L+    + L ++++  + D+   A   K D +L+ +  S +  G  LLL +L +NLLDNA
Sbjct: 305 LQDVAEIPLEDLLQSSVMDIYHTAQQAKIDVRLTLNAHSIKRTGQPLLLSLLVRNLLDNA 364

Query: 355 IRYSGHSSQIAVELSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYRANSQKGDGAGLGMS 414
           +RYS   S + V L+  +      V D G  +      ++ + FYR   Q   G+GLG+S
Sbjct: 365 VRYSPQGSVVDVTLNADN----FIVRDNGPGVTPEALARIGERFYRPPGQTATGSGLGLS 420

Query: 415 ICRDIAALHGGQV 427
           I + IA LHG  V
Sbjct: 421 IVQRIAKLHGMNV 433