Pairwise Alignments

Query, 447 a.a., two-component sensor histidine kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 482 a.a., copper-sensing histidine kinase in two-component regulatory system with CusR from Escherichia coli BL21

 Score =  126 bits (316), Expect = 2e-33
 Identities = 89/332 (26%), Positives = 170/332 (51%), Gaps = 11/332 (3%)

Query: 119 SWRYFQLSLPDQEKGKQ-YVL-VAEKQSIRDEAINEIALSTALPQLILILCLIVVLVVLI 176
           +WR   L +     GK  Y L +A         IN++     +   ++ + ++ ++++ +
Sbjct: 147 NWRMINLPVGPLVDGKPIYTLYIALSIDFHLHYINDLMNKLIMTASVISILIVFIVLLAV 206

Query: 177 ERSFQPIQALKAAIALRSIHKLD-RIYVEKPTVELLPLVETLNQLLNELEQAWQREKRFT 235
            +   PI+++   I   +   LD R+  +   +EL  LV + N ++  +E  + R+  F+
Sbjct: 207 HKGHAPIRSVSRQIQNITSKDLDVRLDPQTVPIELEQLVLSFNHMIERIEDVFTRQSNFS 266

Query: 236 RMAAHELKTPLTVLRVNAENAL-RSTNQEQLKQDLERIFKGIERTDRLIHQLLMLAKVES 294
              AHE++TP+T L    E AL +S +Q++L+  L    + + R  +++  +L LA+ ++
Sbjct: 267 ADIAHEIRTPITNLITQTEIALSQSRSQKELEDVLYSNLEELTRMAKMVSDMLFLAQADN 326

Query: 295 TQTL-RKQPVELANVIKQVIADLAPIAFKQDQQLSFHGESSRLWGDELLLGILFKNLLDN 353
            Q +  K+ + LA+ + +V      +A  +  +L F G+  ++ GD L+L     NLL N
Sbjct: 327 NQLIPEKKMLNLADEVGKVFDFFEALAEDRGVELRFVGDKCQVAGDPLMLRRALSNLLSN 386

Query: 354 AIRYSGHSSQIAVELSDHDGEIEVRVSDTGAAIDDLTREKMFDNFYR---ANSQKGDGAG 410
           A+RY+  S  I V     + +++V V + G  I      ++FD FYR   +  +KG+G+G
Sbjct: 387 ALRYTPPSEAIVVRCQTVNHQVQVSVENPGTPIAPEHLPRLFDRFYRVAPSRQRKGEGSG 446

Query: 411 LGMSICRDIAALHGGQVLLLPRTDERNT-FVV 441
           +G++I + I   H G V +   +D R T FV+
Sbjct: 447 IGLAIVKSIVVAHKGTVAV--TSDARGTRFVI 476